| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3164 |
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| Symbol | |
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| ID | 4458504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3881592 |
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| End bp | 3882314 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639703935 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_847272 |
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| Protein GI | 116750585 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.130009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTCATT ACGATTTCGA CTGGAGTGTT CTTTGGCGCC ACCCATACGG GAAAATGCTG
CTACAGGGTG TATGGACCAC GGTTCATCTG TCGCTGCTGG CCTGGGCCAT CGCCCTGCCG
GTCGGCGTGG CGATCGCGCT GTGCAGGATC ATGCCCTGCC GGGCGGCCCG GCTGGTGGGT
GGCGCCTATG TGGAGACTCT GCGCAACATC CCCTTATTGG TCCAGCTGTT TTTCTGGTAT
TTCGCCGTCC CTTCGCTCCT GCCCGGGAAA ACGGAGCGGT GGCTTTATGC CAATGTCCGT
GACCTGTCTT ATGTCCTGGG CGTTCTGGCG TTGGGGACCT ACACCGCGGC CCGGGTCGCG
GAAGCGGTGC GATCCGGGCT CCTGGCGGTG CCCGCCGGTC AGTTCCGGGC AGCCCTTTCC
ACCGGCTTGA GCCCCGCCGG AACTTACCGG CATGTGATCC TGCCCTATGC CCTCCGGGTC
GTGATTCCCC TGTTGAGCAC GGAGTTCCTG ACCTGTTTCA AGAATTCATC GCTCGCCATG
ACGATCGGCG TCATGGAGAC GACGGGCATG GCCAACTACA TCGATTCGTT CACCTTTCAC
GGCCTGGAAA CCACCACGGC CGCCAGCCTG GTGTATCTTT TGACGAGCCT GTCGGTGATT
GTGCTGATGG GCCGGATCGA GAGTAAGATG CGCATCCCCG GTATGATCGC GCGAGAGAGC
TAG
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| Protein sequence | MLHYDFDWSV LWRHPYGKML LQGVWTTVHL SLLAWAIALP VGVAIALCRI MPCRAARLVG
GAYVETLRNI PLLVQLFFWY FAVPSLLPGK TERWLYANVR DLSYVLGVLA LGTYTAARVA
EAVRSGLLAV PAGQFRAALS TGLSPAGTYR HVILPYALRV VIPLLSTEFL TCFKNSSLAM
TIGVMETTGM ANYIDSFTFH GLETTTAASL VYLLTSLSVI VLMGRIESKM RIPGMIARES
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