Gene Sfum_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3160 
Symbol 
ID4458500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3878183 
End bp3878986 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID639703931 
Productputative CoA-substrate-specific enzyme activase 
Protein accessionYP_847268 
Protein GI116750581 
COG category[I] Lipid transport and metabolism 
COG ID[COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 
TIGRFAM ID[TIGR00241] CoA-substrate-specific enzyme activase, putative 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCC TTGAAAGCGT TGCGGGAATC GACATCGGGT CCCGGTCGAT TGAGCTGGTG 
GTGTTTGAAG GCACGCGGCA GATCCGGCAA ATGAAGGTGC CGACGACATA CGATCCGTTG
GCGCAATGCG AGAAGCTCCT CGACGGGATG AGGGTGGGCC GGGTTGTGGC CACGGGTTAC
GGCCGGAAGC TTTTTATCGA ATCCCTTCGA GGGATTGAAG TCTCGGCCAT CACGGAAATC
CAGGCCTATG CGCTCGGAGC GCGATACCTG TTCCCGGAAG TCCGAACGGT GCTTGATATC
GGCGGTCAGG ACACCAAGGT GATCCTGCTC GCTCCGCACG GCAGGGTGGC GAAATTCGAG
ATGAACGACC GCTGTGCCGC GGGGACGGGT AAATTCCTGG AGTTCATGGC GACGGCCCTG
CAGATCCCCC TGGAGGCATT CGGAGAATTT GCCTTGCGGT CGGACAAGCG TATCCAGATC
AACAGCATGT GCACGGTATT CGCGGAAAGC GAAGCCACCT CGCTCATGGC TCGCGGCGAG
CGCGCCGAAA ACATCGCCAT GGGGCTGCAC CTGGCGATCG TTCAGCGGAC CGTCGGCATG
CTCCGCAGGG TTGGGATGGA GCCGCCGCTG GTTTTTGCCG GGGGGGTGGC GCACAACCCG
TGTGCCGGAA AAGTGCTGGA GGAGCAGTTG AATATTTCGC TTATCATCCC CGACCACCCC
GACATGGTGG GGGCCATCGG CGCTGCCCTC CACGGGATGG CCGGGGCAAA GGAAAGGGGT
ACCCGTTGCG ACCGGAAATC ATGA
 
Protein sequence
MSGLESVAGI DIGSRSIELV VFEGTRQIRQ MKVPTTYDPL AQCEKLLDGM RVGRVVATGY 
GRKLFIESLR GIEVSAITEI QAYALGARYL FPEVRTVLDI GGQDTKVILL APHGRVAKFE
MNDRCAAGTG KFLEFMATAL QIPLEAFGEF ALRSDKRIQI NSMCTVFAES EATSLMARGE
RAENIAMGLH LAIVQRTVGM LRRVGMEPPL VFAGGVAHNP CAGKVLEEQL NISLIIPDHP
DMVGAIGAAL HGMAGAKERG TRCDRKS