Gene Sfum_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3159 
Symbol 
ID4458499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3876776 
End bp3877450 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content61% 
IMG OID639703930 
Productnitrite and sulphite reductase 4Fe-4S region 
Protein accessionYP_847267 
Protein GI116750580 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.948016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGGG ACATACTGGA AAAGGGCGCC ATTCTGCAAA GGGACAAGAC GAGCTACGCA 
ATCGCTCCTC ACGTGCCGGG CGGGATCATC ACGGACTTCA ACCTGCTCCG CAGGATTGCC
GACGTGGCTG AAAAATACGG GGCCAAAGCC GTTAAACTGA CCTCGGCCGA GCGTTTCGCC
CTCGTGGGGC TGCGCGAGGA AGACATCGAC GGGGTCTGGA ATGAGCTGGG CCTGTCTCCC
GGGGCGGCCA TCGGCCTCTG CGTCCGGTCC GTGAAAATCT GCCCGGGAAC GACCTTCTGC
CGCATCGGGG TTCAGGATGC CGTCGCAATG GGGCTCAAGC TGGACGAGAA GTATCACGGA
GTCACCCTGC CCTTCAAATT CAAGATCGGT GTTTCCGGAT GCCCGAACAA CTGCTCGGAG
TCGTCCATCA AGGATTTTGG TCTGGTGGGG ATGCAGAACG GCTGGCGCGT CCTGGCCGGT
GGTTTCGTGT CGGGTCTGAA GCCCCGCCTT GCCGATGTGA TCGCCACCGG TCTCAACGAC
GAGCAGGCAT TGGCCCTGGC GGACAAGGTG ATCGACTGGT TTCAGAAAAT GGGGAAAACC
AAGCGGTTGG GCCGGGTGAT CGACGAGGTC GGCCTGGAGA AGTTTCTGGG AGACCTGGGA
CTGCCCAACG CGTGA
 
Protein sequence
MAGDILEKGA ILQRDKTSYA IAPHVPGGII TDFNLLRRIA DVAEKYGAKA VKLTSAERFA 
LVGLREEDID GVWNELGLSP GAAIGLCVRS VKICPGTTFC RIGVQDAVAM GLKLDEKYHG
VTLPFKFKIG VSGCPNNCSE SSIKDFGLVG MQNGWRVLAG GFVSGLKPRL ADVIATGLND
EQALALADKV IDWFQKMGKT KRLGRVIDEV GLEKFLGDLG LPNA