Gene Sfum_3156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3156 
Symbol 
ID4458531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3873307 
End bp3874209 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content60% 
IMG OID639703927 
Producthypothetical protein 
Protein accessionYP_847264 
Protein GI116750577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000321765 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CATTCCTGAT TTGGGTGACC GCCTGCATGC TGGCCCTGCC GACCTTGGGG 
ACGGCGGCCA CGTTGAGCGG AGTGGTGATC GAGGATGAGT CCGGCGCACC GCTCGATGCG
AGTCTTCTGC TCTACAAGCG GAATGCGACG GGAGGCTTTG ACTTTACGGC CGCCGAGGGA
ACCGATGCAG CCGGTAACTA CAGCTTCAAC TACCTCGAGG CGGGGACTTA CTTCCTTGAA
TGCGAGGCCT ACGCGGACTG TGACCCGGAA ACCGAGTATT GCGCCGACAA GTACCTGCCG
CAACTCTACG ATGGAGTCCA GGCCTGGGAT TTCGCTCACA AGAAGAACAT CGTGCTTGCG
AGCGGCTCCG CGAAGGTTTT GAATCCCATC AGGATCAAGG CCAGGCCGTT TTATTTTGAA
ACCATGCCCA TCGACCCCGT GGTGATTCCC GATTCGGGCG GCACGGTGAA GATCACCGCC
ACGGTGATCA ACACCACGAA AAACATTCTG GGCATGCTGT TCTGGGGCGA GATGGAGCCT
CCGTGCCGCG CGGATCATTC CAGGTTCTAC GATCTCTGGG CGCTCTACCC GTTCGCTCAA
CACACCTGGA AGGTCATCAG GCCGGGCGCC AACAAGGTGG TCCTCACCTG CAGCCTGGGA
GCCCAGGCAC CGGAGGGGCC CTATTTCTAC CTGGTATTCG GGGGAGCCGG ATACGTGTCC
CCCAAGATGC CCCCGCTGGA GGGTTTCTTC TGCAAGGGCG TCTCCGCGGA TGAATGCACG
ACAGACTTTG CCGTTGCAGG CCGCCGCGGG GGAACCGCGA GGGCGGTCCG GGCAAACAGG
AACATCGCAA CGAGATTTTC CGAGGACGGC AAGGTCCTGG AAACGGGACC TCGGAAGAAA
TGA
 
Protein sequence
MKKTFLIWVT ACMLALPTLG TAATLSGVVI EDESGAPLDA SLLLYKRNAT GGFDFTAAEG 
TDAAGNYSFN YLEAGTYFLE CEAYADCDPE TEYCADKYLP QLYDGVQAWD FAHKKNIVLA
SGSAKVLNPI RIKARPFYFE TMPIDPVVIP DSGGTVKITA TVINTTKNIL GMLFWGEMEP
PCRADHSRFY DLWALYPFAQ HTWKVIRPGA NKVVLTCSLG AQAPEGPYFY LVFGGAGYVS
PKMPPLEGFF CKGVSADECT TDFAVAGRRG GTARAVRANR NIATRFSEDG KVLETGPRKK