Gene Sfum_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3146 
Symbol 
ID4458521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3862640 
End bp3863044 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content62% 
IMG OID639703917 
Productcupin 2 domain-containing protein 
Protein accessionYP_847254 
Protein GI116750567 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCG GCGCAAAGTC GATTCGATCA GAAAGGGAGC AAGGAATGCA CTATGTGAAA 
GAACAGGATG TCAGCGGCCT GCAGTTGCCG GGAAGGCTCT GGAAGAAGCT CATCGGGCCG
GAAGACGGCA ATTGCATGAA TATGATCCTC GGCGTCGTGT CCTTCCCGCC CGGCAGCGAT
CCGGGGACCC ACAAACACGC GGCCGAGGAG GAAATCATTT ACGTCGTTTC GGGCCGCGGG
GAGACCAGGG TCGGGGACAA GGTCTACCCG CTCGAGCCGG GCGTGGCGGT TTTCACCGAG
CCCGGAGTGG AGCACGGCGT CAGGACCATC GGCGAGGAGC CGCTGGTGCT GGTCAGTGTC
TTCAGCCCTC CCGTGAGGCC GGGGTCCTAC GACAAGAAGA AGTGA
 
Protein sequence
MESGAKSIRS EREQGMHYVK EQDVSGLQLP GRLWKKLIGP EDGNCMNMIL GVVSFPPGSD 
PGTHKHAAEE EIIYVVSGRG ETRVGDKVYP LEPGVAVFTE PGVEHGVRTI GEEPLVLVSV
FSPPVRPGSY DKKK