| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3145 |
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| Symbol | |
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| ID | 4458520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3861338 |
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| End bp | 3862618 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639703916 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_847253 |
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| Protein GI | 116750566 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTATGC TTTCCGTCAT AGGCGTCTTT CTGCTCACCG CCCTGCTCGG ACTGCCGATC
TATTTCTCTT TCGGCCTGAC GGCCGCCTAC GCCTGCGTCG TAGGGGACTT CCCACTCCAG
ATCATCGCCC AGCGGATGAT GATCGGCATG GATTCCTTCG TGCTTCTGGC CATTCCCGGT
TTCGTGCTCG TGGGGGACAT CATGTGCCTG GGGGGGATAT CCAAGCGGGC CGTGGATTTC
TCCAATTCAC TGATCGGCCA GTTCAAGGGC GGACTCGCCA TGGTGACCGT TTTCACCGGG
ATGATCATGG GCGGGATCTC CGGGTCGGCC GTCGCGGACA CGTCCGCCGT CGCCTCGGTG
CTCGTTCCCT CCATGGAAAA GGAGAACTAT CCCAGGGAGT TTTCGGCATC GGTGGTCGCC
ACGGCCGGTC CTTTGGGCAA CATCATCCCG CCGTCCATCC CGATGATCGT CTATTCCATG
ACCGCCGGCC TCTCGCTGCT CGACCTTTTC CTCTCCGGGT ACATTCCCGG CACGATGATC
GGCGTAAGCC TCATGATCAT CTGCCACGTT CTGTCCAAGA GGAGAGGCTA CGGGCCGCCG
GTGCCGTACA CATTCCGCTG GAGGAACGTC TGGGTGGCTT TCCGCGGGGC GGCCCTGGCG
TTGTTCACCC CGATACTCAT AGTCGGTGGA ATCGTCACCG GAGCGTTCAC GCCCACGGAA
TCGGCGATGA TCGGAGTGTT CTACTGCCTG TTCATCGCCC TGTTCGTCTA CAAGGAAATG
ACCTGGGCGC AGCTGCCCAA AATGCTGCTC GAATCGGCCA AGACTACCGC CAAGCTGGTG
ATCATCATCG CATCCGCGGC GGTGTTTTCG TACATCTCCA TCAACGAGGG CGTGCCCGAG
ATGTTCGAGA AATTCATGCT CAGCGTGTCC GACAACAAGT ATGTGATCCT GATGCTGCTG
AACGTGATCC TCCTGCTGCT CGGGTGCCTC ATCGACATTC TCGTGGGCAT CATCATCATC
GTGCCCGTGC TCATCCCGCT CGGAGAGTCC CTGGGCATCG ACCCGCTGCA CATGGCCATG
ATCTTCGTCA TGAACATGTC CATCGGGCTG CTGACGCCCC CCGTGGGATA CTGCCTGTAC
GTGTCGGCAT CCATCGCGAA AGTCCCGATG GAAAAGGTGA CCCGGTTCTC GGTCCCGCTT
GTCATCACGA TGATCGGGAT CCTGGTGCTC ATCACCTTTT TCCCGACATT CACCACTTTC
GTCCCGAACC TGTTCCATTG A
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| Protein sequence | MFMLSVIGVF LLTALLGLPI YFSFGLTAAY ACVVGDFPLQ IIAQRMMIGM DSFVLLAIPG
FVLVGDIMCL GGISKRAVDF SNSLIGQFKG GLAMVTVFTG MIMGGISGSA VADTSAVASV
LVPSMEKENY PREFSASVVA TAGPLGNIIP PSIPMIVYSM TAGLSLLDLF LSGYIPGTMI
GVSLMIICHV LSKRRGYGPP VPYTFRWRNV WVAFRGAALA LFTPILIVGG IVTGAFTPTE
SAMIGVFYCL FIALFVYKEM TWAQLPKMLL ESAKTTAKLV IIIASAAVFS YISINEGVPE
MFEKFMLSVS DNKYVILMLL NVILLLLGCL IDILVGIIII VPVLIPLGES LGIDPLHMAM
IFVMNMSIGL LTPPVGYCLY VSASIAKVPM EKVTRFSVPL VITMIGILVL ITFFPTFTTF
VPNLFH
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