Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3144 |
Symbol | |
ID | 4458519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3860839 |
End bp | 3861336 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639703915 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_847252 |
Protein GI | 116750565 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.36824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCCG GTAAAGTGCT CGACGCTGTC GATCGGGTCA TCAGCTTCAT TTCCGCCGCG TTCATCGCCG TCATGGTGTC CATTCTTTTC TACGCGGTGG TGATGCGGTA CGTGCTGCAC AGCCCGCCCG AGTGGTCCAT CGAGATCACC CGGTTCATGT TCGTCTGGAT GGTTTTCCTG GCGGCCGCCC TGGTGTCGCG GGACGATACC CATCTGAACA TCGGCCTTTT CATCGACTGG CTTCCCGCCC GATTCAAGAA ACCCTTTCGT GTGCTGAACC TGGCCCTCTC GCTCCTGTTC TGCGGCGTGC TGATCTACCA GGGCATGAAG ATCTATCCCA AGGTGGCGCA GGCGACGTCG CCCACCTTCG GAATCTCCAT GGGATGGCTC TACCTGCCGC TGACGGTGGG GAGCGCTCTC ATGTCCTTGT TTATCGTCGA AAACATCGTC CGTCTGCTGC TGGACAAGCC GAGGCAGCCG GCTTCCGGGG AGAAATGA
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Protein sequence | MSPGKVLDAV DRVISFISAA FIAVMVSILF YAVVMRYVLH SPPEWSIEIT RFMFVWMVFL AAALVSRDDT HLNIGLFIDW LPARFKKPFR VLNLALSLLF CGVLIYQGMK IYPKVAQATS PTFGISMGWL YLPLTVGSAL MSLFIVENIV RLLLDKPRQP ASGEK
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