| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3143 |
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| Symbol | |
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| ID | 4458518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3859748 |
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| End bp | 3860770 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639703914 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_847251 |
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| Protein GI | 116750564 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.285413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTGC GAAGAGTGTT CAAGATGTTG GGTCTGGTTG GTCTTTGTCT GCTCTGTTCG
GCCGTGCTGA CGGTTCCGAC CGTCCAGGCC GCCAAGACGA TCCGAGTGGC CACGGTCGCC
CTTCCCGAAA CCACCATTTA CCAGGGTCTC GAGAAGTGGC AAAAGGTTCT CAAGGAGCAG
TCCAAGGGCA AGCTGGAGAT CAAGATCCTC GGTCGTGCCG TCATGGGCGG CGACAGGGAA
ATGATCGAGG GATGCCGCCT GAACACGCTG GATGCCGCCG TCATCAGCGG GTCGGTCCTG
GCCACCATCA TTCCCCAGTA CTTCATGGTC GCCATGCCTT ACTTCTTCAA CGACCACAAG
GAAGCGAACG CGTATCTCGA CGGAGCCCCC GGACAGAAAC TGCTCGGCAT GCTCAATGAG
AAGGACATCG TCGGCCTCGG ATGGTCGACC TGGTCGTTCC GGGGCATCTG GAACAACGTC
CGTCCCATTA CGAAGCCCGA AGACATGCAG GGACTGAAAA TCCGGACCCT CGAGACCCCC
ATGGACATGT CCATCGTGAC CTACATGGGA GGCATCAGCA CCCCCATGGC CTGGAGCGAG
TGCCTGCTCG GCCTGCGCCA GGGTACCGTG GACGGCATCG CCACCACCTA CGGCCTCGGC
TACGCCCTGA AGCTCTACGA ACTGGCCAAA TTCGCTTCCC AGACGAAACA CTACTACGAA
CCCGCGCCCC TCATCATGAG CAAGAAGCTC TTCGACGAAT TCACGCCGGA GGAGCAGAAG
ATCATCAGGA AATCCGCCGC GGAAGCGATG CAGTGGACCA GGATGGAGCA GATGAAGGTC
GACGAGGCCA GCCAGAAGCT GCTCGAAGGC AAGGGAACCA AGGTCAATTC CCTGACCCCG
GAAGCCTTCA ATGCATTCCG CGAGAAGACG AAGCCGGTAT ACGAGCAGTT CCGGGCCAAG
ATCGGCCCCG AGTTCATGGA TGAAAGCACC GCCTTCGTCA AGGCGTTCAG AGAAAAGAAG
TAG
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| Protein sequence | MKVRRVFKML GLVGLCLLCS AVLTVPTVQA AKTIRVATVA LPETTIYQGL EKWQKVLKEQ
SKGKLEIKIL GRAVMGGDRE MIEGCRLNTL DAAVISGSVL ATIIPQYFMV AMPYFFNDHK
EANAYLDGAP GQKLLGMLNE KDIVGLGWST WSFRGIWNNV RPITKPEDMQ GLKIRTLETP
MDMSIVTYMG GISTPMAWSE CLLGLRQGTV DGIATTYGLG YALKLYELAK FASQTKHYYE
PAPLIMSKKL FDEFTPEEQK IIRKSAAEAM QWTRMEQMKV DEASQKLLEG KGTKVNSLTP
EAFNAFREKT KPVYEQFRAK IGPEFMDEST AFVKAFREKK
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