Gene Sfum_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3142 
Symbol 
ID4458517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3857701 
End bp3859638 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content65% 
IMG OID639703913 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_847250 
Protein GI116750563 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGG ACAGATTGTT CGAGCCGGTC CGGATAGGCC CCCTGACCCT CCGGAACCGC 
CTGGTCATGA CGGCGATGTC CACCTGTTTT GCGGGGCCGC GCGGGGAGGT CAACGACCGC
ATCGCCGAAT ACTATGCCGC GCGCGCCGCC GGCGGAACCG CTTTGATCAC CGTCGAAGAG
GCGTACATCC ATCCCATGCT GCCCCACGTG AAAAATGCCC TCGGGGCATA CGGCGGCCAC
CTGGTGGGCG GCCTGGCGCA CCTGGCCCGG CGCATCCACG ACGGCGGGGC GCTCGCTTCC
CTGCAACTCG GCCTCTATTT CCGACAGCAG TTGAACGGAT TTCCCTCCTA CACGGTTTCG
GCCGATTCGC CTTTCCGCGA ACCGGGCTGC AAGGAACTGA ACCACGAGGA AATCCGCTAC
CTCACCGTGT TGTTCGCGGA TGCCGCGGAG CGGACGCGGG CGGCCGGATT CGACGTGGTG
GAAATCCATG CCTGCCACGG ATGTCTGCTG TCCGAGTTCC TTTCTCCTTA TTGGAACAAA
AGAAAAGATG AGTACGGCGG GGACCGGGCG GGACGTTTTC GCTTCCCCCT GGAAATCCTG
GCCGAGATTC GGTCGCGCCT CGGATCGGAA TATCCTGTGA TCTACCGGAT CTCGGGGAGC
GAGTTCGTCC CCGAAGGATT CTCCGCGGAG GATGCGGTGG CGCTTTCAAT CGCCCTTGAG
AACGCCGGGG TTACGGCGAT CAACGTGTCG GGCGGGTTGG GGCACAAGAA CCACATCGCC
ATCCCTCCTT CGGACGTTCA GAGGGGCTTG CTGCTTCCCA TCGCAAAGTC AATCAGGGAA
AAAGTGAAGG TCCCCGTCAT CGTCGGGAAC TCGATGACCC CGCAGATCGC CGCGGAAGCG
GTGGAAGCCG GCCAGGCGGA TCTCATCGGT CTGGGACGGC CGCTCATAGC CGACCCGGAA
TGGCCGCGCA AGGTGGCCGA GGGCCGCATT CACGAGCTCC GCCAGTGCAT CCGGTGCAAC
CAGGGTTGTT TCGGTGCCTT GAGGGACCCG CGGCGGCCCT TCATCAGTTG CATGTACAAC
CCGGTTGCGG GCCGGGAGTT CGAATCGCCG ATCACCGAAG CCCCGGTGAA GAAGCGCGTG
GTGGTGGTCG GCGCGGGGCC GGCCGGTTGC GAAGCGGCAC GGGTCGCCAG GCTGCGCGGG
CACGAAGTGA TTGTGCTGGA AAAACAGGAC CGGGTGGGAG GCCAGTTCAA CCTGGCGGCG
CTGCCGCCCA AGAAGGGAGA TTTCGGCAAG CTGGTGGAGT TTTACGCGGG AGAGCTTCCC
CGCCTGGGGG TTGACGTCCG GCTGGGCACG GCCGCGACCA CGGAGTTGCT GAAATCCCTG
AAGGCCGATG TCTATGTGCT GGCGACGGGG TCGACGTCGA GTCGTCCTCC CATCCCCGGG
GCCGATCTCC CGCACGTGTT CATGGTTCCG GAGGTGCTCT GGGGGCAGGC GGCGATCGAT
CCGGGCCCCG TGGTGGTCGT CGGCGGGGGG GCTTCCGGGC TCGAAACGGC CGACCTGATT
GCCGGGAAGG GCATCGAGGT CACGGTGATC GAGGTCCTAG ACACGGCCGG ACGGGATATC
ATCGGCGGGA TCGGCGTTCG GGAATCGCTC ATGTCGAGGC TCTCCGCCAA CGGCGTGACC
GTGCTCACCG GTCACCGCGT GGTCGCCATC CGGGAAGACG CGGTGATCGC CTCCGACCGG
CCGCTCATCG GAGGAGGCAG GGAGGTCGCG ATCCCGGCCC GCTCGGTCGT GCTGGCGCTC
GGAATGCGGC CGGTGGACGA TCTGTCGGCC AGGCAGGCGG AATGCGGGGG AACCTGGCAC
GTTGTGGGTG ACAGCCGGAA TCCCGGCAAT GCTTTCAACG CGATTCACCA GGCGTTTGAG
CTTGCCGTCG GGATATGA
 
Protein sequence
MSMDRLFEPV RIGPLTLRNR LVMTAMSTCF AGPRGEVNDR IAEYYAARAA GGTALITVEE 
AYIHPMLPHV KNALGAYGGH LVGGLAHLAR RIHDGGALAS LQLGLYFRQQ LNGFPSYTVS
ADSPFREPGC KELNHEEIRY LTVLFADAAE RTRAAGFDVV EIHACHGCLL SEFLSPYWNK
RKDEYGGDRA GRFRFPLEIL AEIRSRLGSE YPVIYRISGS EFVPEGFSAE DAVALSIALE
NAGVTAINVS GGLGHKNHIA IPPSDVQRGL LLPIAKSIRE KVKVPVIVGN SMTPQIAAEA
VEAGQADLIG LGRPLIADPE WPRKVAEGRI HELRQCIRCN QGCFGALRDP RRPFISCMYN
PVAGREFESP ITEAPVKKRV VVVGAGPAGC EAARVARLRG HEVIVLEKQD RVGGQFNLAA
LPPKKGDFGK LVEFYAGELP RLGVDVRLGT AATTELLKSL KADVYVLATG STSSRPPIPG
ADLPHVFMVP EVLWGQAAID PGPVVVVGGG ASGLETADLI AGKGIEVTVI EVLDTAGRDI
IGGIGVRESL MSRLSANGVT VLTGHRVVAI REDAVIASDR PLIGGGREVA IPARSVVLAL
GMRPVDDLSA RQAECGGTWH VVGDSRNPGN AFNAIHQAFE LAVGI