Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3142 |
Symbol | |
ID | 4458517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3857701 |
End bp | 3859638 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639703913 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_847250 |
Protein GI | 116750563 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATGG ACAGATTGTT CGAGCCGGTC CGGATAGGCC CCCTGACCCT CCGGAACCGC CTGGTCATGA CGGCGATGTC CACCTGTTTT GCGGGGCCGC GCGGGGAGGT CAACGACCGC ATCGCCGAAT ACTATGCCGC GCGCGCCGCC GGCGGAACCG CTTTGATCAC CGTCGAAGAG GCGTACATCC ATCCCATGCT GCCCCACGTG AAAAATGCCC TCGGGGCATA CGGCGGCCAC CTGGTGGGCG GCCTGGCGCA CCTGGCCCGG CGCATCCACG ACGGCGGGGC GCTCGCTTCC CTGCAACTCG GCCTCTATTT CCGACAGCAG TTGAACGGAT TTCCCTCCTA CACGGTTTCG GCCGATTCGC CTTTCCGCGA ACCGGGCTGC AAGGAACTGA ACCACGAGGA AATCCGCTAC CTCACCGTGT TGTTCGCGGA TGCCGCGGAG CGGACGCGGG CGGCCGGATT CGACGTGGTG GAAATCCATG CCTGCCACGG ATGTCTGCTG TCCGAGTTCC TTTCTCCTTA TTGGAACAAA AGAAAAGATG AGTACGGCGG GGACCGGGCG GGACGTTTTC GCTTCCCCCT GGAAATCCTG GCCGAGATTC GGTCGCGCCT CGGATCGGAA TATCCTGTGA TCTACCGGAT CTCGGGGAGC GAGTTCGTCC CCGAAGGATT CTCCGCGGAG GATGCGGTGG CGCTTTCAAT CGCCCTTGAG AACGCCGGGG TTACGGCGAT CAACGTGTCG GGCGGGTTGG GGCACAAGAA CCACATCGCC ATCCCTCCTT CGGACGTTCA GAGGGGCTTG CTGCTTCCCA TCGCAAAGTC AATCAGGGAA AAAGTGAAGG TCCCCGTCAT CGTCGGGAAC TCGATGACCC CGCAGATCGC CGCGGAAGCG GTGGAAGCCG GCCAGGCGGA TCTCATCGGT CTGGGACGGC CGCTCATAGC CGACCCGGAA TGGCCGCGCA AGGTGGCCGA GGGCCGCATT CACGAGCTCC GCCAGTGCAT CCGGTGCAAC CAGGGTTGTT TCGGTGCCTT GAGGGACCCG CGGCGGCCCT TCATCAGTTG CATGTACAAC CCGGTTGCGG GCCGGGAGTT CGAATCGCCG ATCACCGAAG CCCCGGTGAA GAAGCGCGTG GTGGTGGTCG GCGCGGGGCC GGCCGGTTGC GAAGCGGCAC GGGTCGCCAG GCTGCGCGGG CACGAAGTGA TTGTGCTGGA AAAACAGGAC CGGGTGGGAG GCCAGTTCAA CCTGGCGGCG CTGCCGCCCA AGAAGGGAGA TTTCGGCAAG CTGGTGGAGT TTTACGCGGG AGAGCTTCCC CGCCTGGGGG TTGACGTCCG GCTGGGCACG GCCGCGACCA CGGAGTTGCT GAAATCCCTG AAGGCCGATG TCTATGTGCT GGCGACGGGG TCGACGTCGA GTCGTCCTCC CATCCCCGGG GCCGATCTCC CGCACGTGTT CATGGTTCCG GAGGTGCTCT GGGGGCAGGC GGCGATCGAT CCGGGCCCCG TGGTGGTCGT CGGCGGGGGG GCTTCCGGGC TCGAAACGGC CGACCTGATT GCCGGGAAGG GCATCGAGGT CACGGTGATC GAGGTCCTAG ACACGGCCGG ACGGGATATC ATCGGCGGGA TCGGCGTTCG GGAATCGCTC ATGTCGAGGC TCTCCGCCAA CGGCGTGACC GTGCTCACCG GTCACCGCGT GGTCGCCATC CGGGAAGACG CGGTGATCGC CTCCGACCGG CCGCTCATCG GAGGAGGCAG GGAGGTCGCG ATCCCGGCCC GCTCGGTCGT GCTGGCGCTC GGAATGCGGC CGGTGGACGA TCTGTCGGCC AGGCAGGCGG AATGCGGGGG AACCTGGCAC GTTGTGGGTG ACAGCCGGAA TCCCGGCAAT GCTTTCAACG CGATTCACCA GGCGTTTGAG CTTGCCGTCG GGATATGA
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Protein sequence | MSMDRLFEPV RIGPLTLRNR LVMTAMSTCF AGPRGEVNDR IAEYYAARAA GGTALITVEE AYIHPMLPHV KNALGAYGGH LVGGLAHLAR RIHDGGALAS LQLGLYFRQQ LNGFPSYTVS ADSPFREPGC KELNHEEIRY LTVLFADAAE RTRAAGFDVV EIHACHGCLL SEFLSPYWNK RKDEYGGDRA GRFRFPLEIL AEIRSRLGSE YPVIYRISGS EFVPEGFSAE DAVALSIALE NAGVTAINVS GGLGHKNHIA IPPSDVQRGL LLPIAKSIRE KVKVPVIVGN SMTPQIAAEA VEAGQADLIG LGRPLIADPE WPRKVAEGRI HELRQCIRCN QGCFGALRDP RRPFISCMYN PVAGREFESP ITEAPVKKRV VVVGAGPAGC EAARVARLRG HEVIVLEKQD RVGGQFNLAA LPPKKGDFGK LVEFYAGELP RLGVDVRLGT AATTELLKSL KADVYVLATG STSSRPPIPG ADLPHVFMVP EVLWGQAAID PGPVVVVGGG ASGLETADLI AGKGIEVTVI EVLDTAGRDI IGGIGVRESL MSRLSANGVT VLTGHRVVAI REDAVIASDR PLIGGGREVA IPARSVVLAL GMRPVDDLSA RQAECGGTWH VVGDSRNPGN AFNAIHQAFE LAVGI
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