Gene Sfum_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3140 
Symbol 
ID4458515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3855233 
End bp3855769 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content64% 
IMG OID639703911 
Productpyruvate/ketoisovalerate oxidoreductase, gamma subunit 
Protein accessionYP_847248 
Protein GI116750561 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTG TGGAAGTGAC CATAGCGGGT GTCGGAGGCC AGGGGTCCAT TCTGGCCGGG 
CAGATTCTCG GGGCTGCGGC GGTGATGTAC GACGGGAAAT ACGCCGCGCA AACCCAGGCT
TATTCCTCCG AATTGAGAGG CGGCTTTGCG GCGGCGTGGC TGATCATATG CGAAAATCCC
GTGGTCTTCC CCCGCGTGAC CCATCCCGAC GTCCTGGTGG CGCAGGCGCA GGATTCCATC
ACGCGGTTTG CGTCGGGCCT GAAACCCGCG GGGACTCTGA TCATCGACAG CGACATGGTG
ACTGAGCCGC CCGGAGGCGC GGGCCGCCTC TACAAGGTCG CCGCCACGAC CATCTCGCGC
AACCGGCTCA ACGCGCCGAT GACCGCCAAC ATGGTGATTC TCGGGGCGTT CTGTCGCGTG
ACGGAAGTGG TATCGAGGGA AGCCCTGGAG AAGGCGATCC GGGATTCCGT GCCGCAAGGC
AAAGACAAAA TCAACCTGGA GGCTTTCGAC GCGGGCTATC AGAGCGTCGC GGGCTAG
 
Protein sequence
MSRVEVTIAG VGGQGSILAG QILGAAAVMY DGKYAAQTQA YSSELRGGFA AAWLIICENP 
VVFPRVTHPD VLVAQAQDSI TRFASGLKPA GTLIIDSDMV TEPPGGAGRL YKVAATTISR
NRLNAPMTAN MVILGAFCRV TEVVSREALE KAIRDSVPQG KDKINLEAFD AGYQSVAG