Gene Sfum_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3130 
Symbol 
ID4458540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3844145 
End bp3845077 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content59% 
IMG OID639703901 
Productmethylenetetrahydrofolate reductase 
Protein accessionYP_847238 
Protein GI116750551 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA CCACCCCAAG CAAACTGCAA AAGATTCTTG CTGCCGGACA CTTTGGCGTC 
ACCACCGAAT GCGGGCCTCC CAGGAGCTGC GATGGCGGTG TCGTGGAAGA GAAAGCCAAA
CACGTCGCCG GTCACGTGGA TGCGATCAAC GTCACCGACA ACCAGACGGC GGTGGTTCGG
ATGTGCAGCC TCGCCTCCTG CATCCGGCTC CGAATCATGG GCCTCGAACC GGTGCTTCAG
ATGGTGACCC GCGATCGGAA CCGCATCGGG CTCCAGAGCG ACTTGCTCGG AGCGGCGTCC
TTCGGGATCA ACAACGTGCT GTGCCTGACC GGCGACCACC AGAGCTTCGG CGATCACCCG
GAAGCGGCCA ACGTTTTCGA TCTCGATTCC ACCCAGCTCA TTCAGACCGT GAAGTTGATG
CGCGACGACG CCAAGCTGCT GAGCGGAGCC GAGTTGAAAA CGTGCCCTCA GATGTTCATC
GGAGCGGCCG AAAACCCGTT CGCCGATCCG TTCGATGTCC GGGTTTCGCG CCTGGCCAAA
AAGGTCGCGG CGGGAGCGCA ATTCATCCAG ACCCAGTGCA TCTACAACCT GGACAAGTTC
AAGAAGTGGA TGCAGGGCAT CGTCGACCGG GGACTCCACG AAAAGGTTCA TATCCTCGCC
GGGTTTACGC CCATGAAGGG GGTGGGTATG GCCAAGTACA TGAAAAATCG GGTCCCGGGA
ATGGACGTTC CGGATGACAT CATCAAAAGG CTGCAGGGAG TCCCCAAGGA AAAACAGCCC
GATGAGGGAA TCAACATCTG CATCGAACAC ATCCAGGAAC TGAAGGAAGT GAAAGGCGTC
GCCGGCTTTC ACATCATGGC GATCGAATGG GAGGAGAAGG TTCCCGAGAT CGTGGAGCGC
GCGGGACTGT ATCCCAGGCC CAAGGTCGAT TGA
 
Protein sequence
MSTTTPSKLQ KILAAGHFGV TTECGPPRSC DGGVVEEKAK HVAGHVDAIN VTDNQTAVVR 
MCSLASCIRL RIMGLEPVLQ MVTRDRNRIG LQSDLLGAAS FGINNVLCLT GDHQSFGDHP
EAANVFDLDS TQLIQTVKLM RDDAKLLSGA ELKTCPQMFI GAAENPFADP FDVRVSRLAK
KVAAGAQFIQ TQCIYNLDKF KKWMQGIVDR GLHEKVHILA GFTPMKGVGM AKYMKNRVPG
MDVPDDIIKR LQGVPKEKQP DEGINICIEH IQELKEVKGV AGFHIMAIEW EEKVPEIVER
AGLYPRPKVD