| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3123 |
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| Symbol | |
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| ID | 4458533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3836924 |
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| End bp | 3838171 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639703894 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_847231 |
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| Protein GI | 116750544 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | [TIGR03472] hopanoid biosynthesis associated glycosyl transferase protein HpnI |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00523086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCCCTG AAAGGGATCG GCCCTCGGGT CCGCGAATCC GCCGGCCGCA TCGATTGAAC
CCATGGCATG AAATGCAGGC TCCGATGCTC ACCGATTGTG TCGTTTTTTT CCTGTCCCTG
CTGTCCCTTG CCGGGTGCGC CTATTACCTC ACCTGCATCG TTGCCGCACG GCGGTTCTTT
TCCCGCCCGC GCTCCGCTGC GCCGGTCTCC GCGGTCCGAC CCGCCTCGAT TCTCATTCCT
CTGTGCGGCG CCGATTTCCA GGCCTATGAC AACTACGCTT CGTTCTGCCG CCTGGACTAC
CCCGAGTTTC AGCTCGTGTT CGGCGTCCAG GACCCCATGG ACAGTTCGAT CCCGGTGGTG
GAACGGCTGA AGGAGAACTT CCCTCACTGC GACATTCATC TGGTGATCGA CTCGAAGGCC
ATCGGGACAA ACCCCAAGGT GAGCAATTTG AACAACATGC TCGCGGCCGC CCGGCATGAA
TTGATCGTAA TTGTGGACAG CGACATCCGG GTGGAAGCGG ACTACCTGTC CACCCTGGTT
CCGGAGCTCG CGGACGAGCG TATCGGCCTC GTCACCTGCC TTTATCGCGC CGGGGCGACC
CCGAATTGGA CGTCATTGCT CGAAGCGGTC GGGATAACGG GCGAGTTTGC CCCGGGTGTT
TTGGTCGCCG ACTTCACCGA AGGCATCCGG TTCGCTTTCG GCGCCACCAT GGCGACCACG
AAAACCAGGC TGTCTTCCAT CGGGGGGTTT GCGGCCATCG CCGATTACCT CGGGGACGAC
TACATGCTGG GAAACCTGCT TTGGAGAGAG GGATACGAAA TCAGGCTGGG AAGGCCGGTG
GTGGAGACGA TGCCGCCTCC GCTCAGCTTC CGCTCGATGC TCAATCATCA AATCCGCTGG
TCGCGAAACA TCCGGGCCTG CCGTCCCATG GGCCATTTCG GGACGGCGAT CACTTACGGC
ACGGTTCCGG CGCTGCTCAA CTTCATTTTC TTCGCCTCGC CCTTTACTTT CCTGCTGCTG
GGCGCCGTTG CGGCCCTGCG GCTTTTTACC GGGTGGTACG TCGGGGTGCG CGGCCTGCGG
GATCGGATAC TGGAAAAGAA CCTCTGGCTG CTGTTGCCTC GGGACCTGTT GGGATTTGGC
GTCTGGTGCG CCAGCCTGAC CGGATGGAGC GTGGAATGGC GAGGACGGCG CTACCGTTTG
CAGAAAGACG GCAGGATGCT GCCGCCGGGC GAGAGACCGG AGCCTTGA
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| Protein sequence | MFPERDRPSG PRIRRPHRLN PWHEMQAPML TDCVVFFLSL LSLAGCAYYL TCIVAARRFF
SRPRSAAPVS AVRPASILIP LCGADFQAYD NYASFCRLDY PEFQLVFGVQ DPMDSSIPVV
ERLKENFPHC DIHLVIDSKA IGTNPKVSNL NNMLAAARHE LIVIVDSDIR VEADYLSTLV
PELADERIGL VTCLYRAGAT PNWTSLLEAV GITGEFAPGV LVADFTEGIR FAFGATMATT
KTRLSSIGGF AAIADYLGDD YMLGNLLWRE GYEIRLGRPV VETMPPPLSF RSMLNHQIRW
SRNIRACRPM GHFGTAITYG TVPALLNFIF FASPFTFLLL GAVAALRLFT GWYVGVRGLR
DRILEKNLWL LLPRDLLGFG VWCASLTGWS VEWRGRRYRL QKDGRMLPPG ERPEP
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