| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3119 |
|---|
| Symbol | |
|---|
| ID | 4458564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3834732 |
|---|
| End bp | 3835226 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639703890 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_847227 |
|---|
| Protein GI | 116750540 |
|---|
| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0995943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TCGCTTTGGT TTCAATCCTT GTGCTGTTTA CAATGGCCTC CGTGGGGGCG
AGCGTCGCTG CGGCCGGGCC GCGTGGTCAC GGTGGCGGAG GAGGGTACGG GGGATGCATG
CTCGGAACCC TGCTCAGCTT GAATCTTTCG GAGGCTCAGA AGCATGACGT CGCCGTGATC
ATGAAATCCA ATCGCGACGA GTTCAGGACG GTGGTCGGGC AAATGAGGGA GGCGAAAAAG
GCCCTGTTCG ACCGGATCAA TGCCGAGCCT CTGGATGAGG AAGCCATCAG GCAGGCCGTC
CGGCAACTCG CAACCGTTGG AGAGCAGGCG GCCGTTTTGA GAGGGCGAGC GCTCTCGGAG
ATCAAGGGCG TGCTCACGCC GGAACAACGC GCGGCACTGG CGGAACAGCG GGCGCATTTC
GGAGCGATGT TTGAAGGGAG AGGGCATCGA GGGAACTTCC TGTTGGATGA CTGGATCGAC
AAGTACGGCA AGTGA
|
|---|
| Protein sequence | MKKIALVSIL VLFTMASVGA SVAAAGPRGH GGGGGYGGCM LGTLLSLNLS EAQKHDVAVI
MKSNRDEFRT VVGQMREAKK ALFDRINAEP LDEEAIRQAV RQLATVGEQA AVLRGRALSE
IKGVLTPEQR AALAEQRAHF GAMFEGRGHR GNFLLDDWID KYGK
|
|---|
| |