Gene Sfum_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3118 
Symbol 
ID4458563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3833716 
End bp3834243 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content58% 
IMG OID639703889 
Producttoluene tolerance family protein 
Protein accessionYP_847226 
Protein GI116750539 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00282764 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTGG TTCTCGACAA AGCGATGGAG ATCCAGACCC GGGGCGATCT TCAGGGTGAG 
GCCCATCGCG CGGAGCGGGC GAAGCTGGTG CGCAAGCTCA TCAGCGACAA TTTCCTGTCC
TCCGAAATGG CCCGGGAGGC GATCAAGGGC CACTGGGACA AACTGTCCGC GGCTCAACGC
TCCGAATTCC AGGGGCTCTT CATTGCGCTC TTCCAGGATT CCTACACCCG GATGGTGCTG
AACTTTCTGC AGCGGGAAAC CATCGAATAC CGCGGAGAAT CCTCGGAAGG CAAAAGCAAG
ATGGTGCGGA CCGTCATCAT GCGCGCCAAC GAACACATCC CCGTGGATTA TATGCTCGAT
TTCAAGAGCA ATAAATGGGG CATCCGGGAT GTGGTGATCG ACGGCGTCAG CATTGTGGAA
AACTACAACA CAACCTTCTC GCGCGCGATA CAGGCCAACG GCATCGGCGA TCTGCTGAGC
AAGATGCGCG TGCAGAAGAA CGCCGTTGTG GGCGATACCA AGCCGTAA
 
Protein sequence
MKVVLDKAME IQTRGDLQGE AHRAERAKLV RKLISDNFLS SEMAREAIKG HWDKLSAAQR 
SEFQGLFIAL FQDSYTRMVL NFLQRETIEY RGESSEGKSK MVRTVIMRAN EHIPVDYMLD
FKSNKWGIRD VVIDGVSIVE NYNTTFSRAI QANGIGDLLS KMRVQKNAVV GDTKP