Gene Sfum_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3114 
Symbol 
ID4458559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3827200 
End bp3828204 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content60% 
IMG OID639703885 
Productglycosyl transferase family protein 
Protein accessionYP_847222 
Protein GI116750535 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.482779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAACAC CACCTGTGGA TACGGATGTT CCCGCGGTCG GACCCGGTCA CGGTCCGGAC 
GTTTCCGTGG TGATCCCGCT TCACAACGAA GCGAGTACAC TCCGGGAACT TTACCAGCGG
GTCAAAGACA CCATGGAAAA CTTGCCGGGA ACCTGGGAAA TGGTCTTGGT GAACGACGGC
AGCACGGACG CCACGCCCGG GATTCTGGAT GAGCTGCACG CGTGCGACTC GAGGGTCGTG
GTTGTCCATC TGCGGCGCAA CTACGGCCAG ACACCCGCCC TCATGGCCGG GTTCGACCAC
GCTCTGGGCG AATACATCGT CGCCATGGAC GGCGATCTGC AGCACGCACC CGAGGAAATC
CCGAATTTCC TGGAGAAAAT CAACGAGGGC TACGACCTCG TTTCGGGCTG GAGGCTGACC
CGATCGGACG CTCTGCTGAC GCGCACGATC CCCTCGCGTA TCGCCAACTG GTTGATCGCC
AAAGTCTCCG GCGTCCAGGT GCACGATTTC GGGACCACGT TCAAGGCGTA TCGGCGTGAC
GTGCTCGCCG ACCTCCACCT CTACGGCGAA CTGCACCGAT TCGTCCCCGC GCTCATCTCC
TTGTACGGAG CGCGCATCGT CGAGATTCCC ATCAAGGACA TGGGGCGCAA CGAGGGAAAA
TCGCACTACG GGCTTTCGAG AACGTTCCGG GTCATGTTCG ACCTGGTGAC GGTGGGTTTT
TTGCGCAGGT ACCTGACGAG GCCGCTGCAC TTTTTCGGCA AGATGTTCCT TGCGTGTGTC
GGCCCGTCTT TCCTGATCGG CACGTTCCTC GCCTACCGCA AGCTCTTCGA TGGAATATCC
ATCATCGAGC ATCACGGACC GCTTGCCATC GTGGCTTCCG TGCTGATGCT GGCGGGAGTC
CAGTTTCTGG CCATCGGTCT GATCGGCGAA ATCCTGGTGC GTATTTACTA TGAGACCCAG
AACAAGAGAA TCTACGCGGT GAAGAGGGTC TGCCGCAGGC CGTAG
 
Protein sequence
MTTPPVDTDV PAVGPGHGPD VSVVIPLHNE ASTLRELYQR VKDTMENLPG TWEMVLVNDG 
STDATPGILD ELHACDSRVV VVHLRRNYGQ TPALMAGFDH ALGEYIVAMD GDLQHAPEEI
PNFLEKINEG YDLVSGWRLT RSDALLTRTI PSRIANWLIA KVSGVQVHDF GTTFKAYRRD
VLADLHLYGE LHRFVPALIS LYGARIVEIP IKDMGRNEGK SHYGLSRTFR VMFDLVTVGF
LRRYLTRPLH FFGKMFLACV GPSFLIGTFL AYRKLFDGIS IIEHHGPLAI VASVLMLAGV
QFLAIGLIGE ILVRIYYETQ NKRIYAVKRV CRRP