| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3112 |
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| Symbol | |
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| ID | 4458557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3823979 |
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| End bp | 3826180 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639703883 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_847220 |
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| Protein GI | 116750533 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA TCTTCATTAT GGCATTCGTC CTGGCATCTT GTCTAACAGG AGCTTATTTT
CTGCACAAAC CGATTCGAAT ATTAAATCGC GATAAGGTCC TCTACCTGTT CGGGGTCGCC
GCCCTGCTGC TTGGATTGAG GCTTTTCCAA GTGCTCTGGG AACGGGGTCC GGGACAACCT
CGTTTCTCCG ATCCGATTTT CGGCTGGAAT GAACCCGTTT TTCTTTCCGC CGCAATCATG
GTATTAGTGG TTTGCGCGCT GCTCGTGCCG ATTGTGATCC GCCGCGGGGA GGAACGGAAA
TCGGCCGGGA AGGGCGCGGA GGAAACGGAG CGGCTTCTGG CGGCGGTGCT TTCCGCATCC
CCCGTCGGTT TCTGCCTGCT CAAGGAAGAC ATCATCCAAT GGGTGAATCA GGCTCTGTGC
GACATACTCG GCCGCGGTGC CGAGGAACTC GAAGGCCGCA GCATCGCCGG GCTTTATGCT
GAAGAGGGCG AGCACGAGCG GGTGAAGACG CAACTGCTCA ACGGGTGCAC CTCTTCGGAG
GGCGCCGGGG CAGCCGCGTG TTGGATTCGC GGGAACGGCT CCACGCTGCA TTGTCTTCTG
CAGGCCGCTC CCACGGGCAT GAGCACCCTC GATGGAAAAC GTGTCCTGGC CGTGATGGAC
ACGTCGGAAT TGAAACGAAA GGAAGAGGCT TTACTCGAAA GCGAGGAACG CTACCGCAGA
TTTTTCGAGG AAGACCTCGC TGCGGCGTAC GTTTCGACCC CGGACGGCCG GTTGTTGTCC
TGCAATCCGG CATTTGTTAG AATATTCGGT TTTCCATCGG TTGAGGCGGC GATCACCAGT
GACCTCAACT TTCTCCAGCC GGCGTCCGAT TCCGAAGCTG GTGTTGTCGA ACTCATCAGG
AAACGGAAGA AGATCGAGAA TTATCGATGT GAGCTCAACC GTTGCGACGG GAAGAGAGTG
CACGTCGTGA TGAACGCCGT GGGGACGTTC ACTCGGCAAG GCGAGTTGAC TCTCCTCAAA
GGCTACCTGC TGGATGTGAC GGATCAGAAG AACCTCGAAG AACAATTGCG CCAAGCCCAG
AAGATGGAAG CCGTGGGGCG GCTTGCAGGA GGGATCGCGC ACGATTTCAA CAATCTGCTC
ACGGCCATTA CCGGCTACGC CGATACGTTG GAATCAAACC TCAAAGGGGA AGACGCTTTG
AGAAAGAATG CGGAAGAAAT CAGAAGGGCT GCGGAAAGGG CCGCCGCCTT GACGAGCCAG
CTCCTGGCCT TCAGCCGCAA GCAGGTTCTG AGGCCGAGAG TACTGGACCT TCGTGACGTT
GTCGCACGCA TGGAGGAAAT GCTTCGCCGT CTGATCGGGG AAAACATCGC GCTTTGCACG
GCTGTCGACG AGGGACTCTG GCGCGTGAAA GCCGACCAGG GACAGATTGA ACAGGTCATC
ATGAACCTGG TCGTGAATGC CCGGGATGCC ATGCCCCAGG GAGGCCGGCT GCTGATCGAA
GCCCGCAACG TCGAGCTCGA CGGCAGCTAC GTCAGCAGAC ACATGGCCGT GAACCCCGGT
TCTTACGTGC TGCTCGCCGT GAGCGACGAC GGCATGGGCA TGAGCAGTGA AACCATTTCT
CACCTGTTCG AGCCCTTTTA TACCACCAAG GAACAGGGAA AGGGAACGGG GCTGGGACTG
GCAACGGTTT ACGGAATCGT GACTCAGAGC GGCGGGCACA TCTGGGTGTA CAGTGAACCG
GGAGAAGGCA CGACATTCAA AATCTATCTG CCCCGGGTGG AAGGCGAGGT CGAAGAAGTG
CTGCCGGCCC GGCAGGAAGC TATTCCGGTC GAAGGCAGCG AGACTATCCT GCTGGTGGAA
GACGATGATC TGGTGAGGAA CATGATCTGT GAAACCTTGA AACAGAATGG CTACACCATG
CTCAACGCCG CCAGTGGAGA TGAAGCGCTG AACCTGTGCG GCGATCACGA GGGGGTGATC
GATCTGCTGG TCACCGATGT GGTCATGCCC GGAATGAACG GGCGGGAACT GGCTGAACGG
TTGTCGACCG CATACCCGCG TCTGAAAACG CTTTTCATCT CGGGCTACAC CGACCACGGC
ATCGTGCACA ACGGCATTCT CGACCCGGAG ACCGATTTTC TGCAAAAACC CTTCAAGTTG
GATGCGCTGG CAAGGAAAAT CCGTCAGATC ATGGACAGCT GA
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| Protein sequence | MNAIFIMAFV LASCLTGAYF LHKPIRILNR DKVLYLFGVA ALLLGLRLFQ VLWERGPGQP
RFSDPIFGWN EPVFLSAAIM VLVVCALLVP IVIRRGEERK SAGKGAEETE RLLAAVLSAS
PVGFCLLKED IIQWVNQALC DILGRGAEEL EGRSIAGLYA EEGEHERVKT QLLNGCTSSE
GAGAAACWIR GNGSTLHCLL QAAPTGMSTL DGKRVLAVMD TSELKRKEEA LLESEERYRR
FFEEDLAAAY VSTPDGRLLS CNPAFVRIFG FPSVEAAITS DLNFLQPASD SEAGVVELIR
KRKKIENYRC ELNRCDGKRV HVVMNAVGTF TRQGELTLLK GYLLDVTDQK NLEEQLRQAQ
KMEAVGRLAG GIAHDFNNLL TAITGYADTL ESNLKGEDAL RKNAEEIRRA AERAAALTSQ
LLAFSRKQVL RPRVLDLRDV VARMEEMLRR LIGENIALCT AVDEGLWRVK ADQGQIEQVI
MNLVVNARDA MPQGGRLLIE ARNVELDGSY VSRHMAVNPG SYVLLAVSDD GMGMSSETIS
HLFEPFYTTK EQGKGTGLGL ATVYGIVTQS GGHIWVYSEP GEGTTFKIYL PRVEGEVEEV
LPARQEAIPV EGSETILLVE DDDLVRNMIC ETLKQNGYTM LNAASGDEAL NLCGDHEGVI
DLLVTDVVMP GMNGRELAER LSTAYPRLKT LFISGYTDHG IVHNGILDPE TDFLQKPFKL
DALARKIRQI MDS
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