| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3100 |
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| Symbol | |
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| ID | 4458580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3810399 |
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| End bp | 3811976 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639703871 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_847208 |
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| Protein GI | 116750521 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.659114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCC TGATTTGCGA TGGAATGCAT GAAGTCGGCC TGTCCATACT CAGGGCCGCC
GAAGGGATCG ATGTGGATGT TCCGGACCAG CCGGGCGCCG AGGAAATCAA GGCGATGCTG
CCCGACTACG ATGCGGTGAT CGTGCGAAGC CGCACCCGCA TCACCGCCGA GCTCATCGAG
AACGCCCCCC GGCTGAAAGT GATCGGTCGA GCCGGCACGG GCGTCGACAA CATCGACGTC
AAAGCGGCGA GCGCGCGCGG CGCCCTGGTC ATGAACACCC CCGGCGCGAA CGCGACCGCG
GCGGCCGAAC ACACCATCGC GATGATGCTC GCCCTGGCCC GGCACATTCC CCAGGCGACG
CAATCCATGC GCGAAGGACG CTGGGACAAG AAACGCTTCA TGGGTACCGA ATTGTTCCAC
CAGACTTTGG GGATCATCGG TCTCGGGAAG ATCGGAAGCA TCGTGGCGGA CCGGGCGCTG
TCAATGAAGA TGGACGTTCT CGGCCACGAT CCGTACATCA TTCCGGAAGC GGCGGCCATC
CTCGGCGTCG AGTGGGTGCC CCTGGACGAG TTGCTGGCCC GCTCCGATTT CCTTACACTG
CATACCCCTT CCACCAGCGA GACTGTTCGC ATCCTGAATC GCGAGACCCT GGCCCGGACC
AAGCCCGGCG TGCGCATCCT CAACTGCGCC CGAGGCGGTC TGATCGACGA GCAGGCGCTC
TACGAATTCC TGCTGAACGG CCACGTGGGT GGGGCGGCTC TGGATGTCTT CGAACAGGAG
CCGCCGGTCG ACAGCCCCTT GCTGAAGCTG GAAAACGTCA TCTTCACTCC GCACCTGGGC
GCGTCCAGCT ACCAGGCTCA GGCCAACGTG GCGCGGGCCA TAGCCACCCA GATCGTTGAC
TACCTCCTCT ACGGGATCAT CCGCAACGCG GTGAATTTTC CGTCCATCCG CCCCCAGGAC
TACGAGAAAA TCAAGCCCTA CCTCGTTCTG GCGGAACGGC TCGGGAGCCT GCAGGGGCAG
GTTTCCACCC CCATTCAGCG GCTCGAGATC ACTTACAGCG GCTCCGACCT TCAGGAACTG
CCTCTTCAGC CCCTCACCCA CACCGTGATC AAGGGCTTGC TCGATCCCAT TCTGGCCGAA
AAGGTCAATC TCGTGAACGC GCCGCTGCTG CTCAAGGAGC GACAGATCGA GCTGATCACG
ACGACCCGTT CCGAATCCAA GGGATACACC GGCGAAATCG CGGTCAAAGC CATCAGCCCG
CGCGAGGAAT TCTCCGCCGC CGGCGCGGTG CTTCAGGGAC ACGAGATTCG CCTGATCCGG
ATCAACGATT ATCGTCTCGA AGCCGAGCTC GAGGGCATCA ACCTCCTGAT CCAGAACTAC
GACAAACCGG GGACCATCGG CTTGATTGGA ACCACCCTCG GGAGCCACCA GGTGAACATC
GCCAACATGC ATTTGAGCCG AACCCCGCGG GACAAGGCGA TCGCCATCAT CCGGCTGGAC
AACGAAGCCC CGCCGGAAGC CATCGAGACG TTGCGGAGGC ATCCAAGCAT CATCAGTGTC
CAGCAGGTCA AACTGTGA
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| Protein sequence | MKVLICDGMH EVGLSILRAA EGIDVDVPDQ PGAEEIKAML PDYDAVIVRS RTRITAELIE
NAPRLKVIGR AGTGVDNIDV KAASARGALV MNTPGANATA AAEHTIAMML ALARHIPQAT
QSMREGRWDK KRFMGTELFH QTLGIIGLGK IGSIVADRAL SMKMDVLGHD PYIIPEAAAI
LGVEWVPLDE LLARSDFLTL HTPSTSETVR ILNRETLART KPGVRILNCA RGGLIDEQAL
YEFLLNGHVG GAALDVFEQE PPVDSPLLKL ENVIFTPHLG ASSYQAQANV ARAIATQIVD
YLLYGIIRNA VNFPSIRPQD YEKIKPYLVL AERLGSLQGQ VSTPIQRLEI TYSGSDLQEL
PLQPLTHTVI KGLLDPILAE KVNLVNAPLL LKERQIELIT TTRSESKGYT GEIAVKAISP
REEFSAAGAV LQGHEIRLIR INDYRLEAEL EGINLLIQNY DKPGTIGLIG TTLGSHQVNI
ANMHLSRTPR DKAIAIIRLD NEAPPEAIET LRRHPSIISV QQVKL
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