Gene Sfum_3097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3097 
Symbol 
ID4458577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3805467 
End bp3808130 
Gene Length2664 bp 
Protein Length887 aa 
Translation table11 
GC content57% 
IMG OID639703868 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_847205 
Protein GI116750518 
COG category[I] Lipid transport and metabolism 
COG ID[COG2937] Glycerol-3-phosphate O-acyltransferase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.189934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT TCTGGCGGGG TCGGCGTGCG GGGACGGAGT TCACCGTTTC GGGCGACCCT 
TTTGGTTATT CGGTCGACAC GAAAGCCAGG GTTCCGCTTC AGGCCTGGAG CGAGCGTCTC
GCTTCCCGCA TTTCCATGCC GGAAGACCAA CAGCACATGC TCGAAGATCT GGCGCGGCGC
GGCACCGTTG TCTATGCGGT CAAGTACCGT TCGCAACTGG ATTTCGTGTA CCTGAATCTG
AGGTTGCACC AGCTTGGTTT GCCTCCGGCA TCCTTTCTGT TCGATCTGCA TCCATACTTC
TACCAGCCGC GCTGGTATGC CCTGAAGCTG CTGGCCTTCC ATTTCTACCA CCTGATACGC
AGGGGGGAGC TTCCGAATCC TTACGACAGC GGGCACTACC GTGAGAAAAT AAAAAAAGGC
GAATCGGGTT TGCTCTTTTT GCTGGGCAAG AGGGGGTACT ACCGCCGGGC CGTGCTCGTT
GGAAACGACC CCCTGGAGCT GCTGCTCGAG GTTCAGCGGG AGACCGATCG CCCCATATTC
GTCGTGCCGA TCATGCTGCT CTATACCCGG CATCCGGGCA GGGAACGCAA GGGGATGCTC
GAGGTGTTCC TCGGTCAGAG AGAGCAGCCG GGGCATTTGC GCAAACTCGT GGCGTTCTTT
CGCGGTTCTC CGAATTGCGT GATGGAAGCC GGGGAAGCTC TGAACCTGCA GGAAGTGCTG
CCCGAGCTGG CGGAGGGGCC GTACCACAGG CGCAAGCAAG TTTTCGAGAT CCGTCGTGGC
TTGATCGATT CGGTGGATGA GATCAAACGG GCGGTGGTGG GCCCCACGCT GAAGAGCAAG
CTCGAGTTGA AGGAGATCAT CCTGCACCAC CCGCGCCTGG ATGCTTTCAT GCAGCGGCGA
GCCCGTTCGC AGAACCAGGA GATCTGGAGG GTCCGCAAGG AGGCCGACGA CTACCTCGAG
GAAATCGCGG CCAATTACAG CACCACCCTC ATTCAGGTCG GGGAGAAGAC CCTCAACTGG
GTCTGGAACA ACCTGTTCGA CGGGATCGAA GTGGATGTCG ACAGCCTGCA GAAGGTGAAG
CGGGCCGCGC GGCACGACAC TCTCGTCTAC ATACCGTGTC ACAAGAGTCA TATCGACTAC
CTGGTGCTCT CGTGCATTCT GTTTCAGAAC AACCTGACCT GTCCGTTCAT CGCCGCGGGG
AAGAACCTGT CCTTCTGGCC GCTGGGACCG GTCTTCCGAA GAGGGGGTGC CTTCTTCATC
CGCCGCAGTT TCAAGGGCCT GAAGTTCTAT TCCGAGGTGT TTTCGCTCTA TGTGAAGACC
ATGGTGCAAC TGGGGCACAA CATAGAGTTC TTCATCGAAG GAGGGCGCAG CCGCACGGGG
AAAATGGTCC TGCCCAAGCT CGGGTTGCTC GCCATCCTGA TCCAGGCGGT CGAGGACGAA
TTCCTGGACG ATCTGGTTTT CGTGCCCACA TCCATCAGCT ACGATCGGAT TCCGGAGGAG
GAATCCTACA CCAAGGAAGT TGCGGGCGGG AGCAAGGTCG AGGAGAATAT TCGTCAACTG
GTTCGTGCCA GGGGATTTCT CAAGAAACGG TATGGGCGCA TCTACGTCAC TTTCGCCGAG
CCCGTTTCCC TGCAGCGCTA CCTCGAACGT TACCGGGGAG ACTCCACGAA GCTGTTGCCC
AAGGAACGGC ACGCCATGTA CCGGGATTTC GGCTACCGGA TCATCAACAG CATCAATCAG
GCCACCCTGG TGACCCCTCA TGCCCTGGCC GCTTCGGCCC TGTTGACGTC GGAGCGGCAC
GGAGTTTCGA AGGCGGAATT CCACGAGGTC TGTGATATGT TCCACGGTTA CCTGAACAAC
TGCGGGGTGA AGCTTTCGAA GACGTTGCGC AACTACCAGG CGAGCCTCCA GGATACGCTC
TGGGACCTCG AACGGGGTAA GATCATCGGG AAGCTCAAGG ATGAAGACGA CGACCTCGAG
GAAGAAGTCT TCACCATGGA CGACAGCAAG CGCCTTCTGC TCGAGTATTA CAAGAACAAT
CTGATCCATT TTCTGCTGCC CCCGGCTTAT GTCGCCACCT CGATCCTGTC GCAGCAGACG
TTTCGTTTCA GCATTTCCCA GGTCGTGGAA GATGTCGCGT TCATGAAAAA CTTCTTCAAG
TTCGAATTCG TATACGACAA TGAAGTGAGC GACGAGAAGC TGGTGGAGGG GGTCCTCGAC
AGCTTCAACA CCCTGGGTTG GCTGCACCTC CTGGGCGAGG AAGATCAGCC TTACACGCTG
TCTCATAGAG GCCAGCAGGC CGCTCATTCC TTCCACGGCC TGTTGCGCAA CTACTTCGAG
GGCTACTGGC TGGTGCTGAG GGCGACACGC TACCTGCAGA AGAAACCGTA TACGGAAAGA
GATTTCATCA AGAAGGTTCT CTCCCTGGGA CAGAAGGCTC TGAAGCTGGA ACTGGTGGAG
CGCCCCGAGT GCATTTCCAA GATGATTTTC GGGAACGCGC TGAAATTTTA TGTCGAAAAG
AACATCATCG AAAAGGTCGA CTGCGACAAG GGCAAGGAAA AAGAGCAGGA ATGCTATACG
GATGCGGGCA ACCGGGCACT GATACAACAC TACAGCAAGC AGATCAGCCG TTTCCTCCGG
TCGCCTCATT TCGCGCTCCA ATAG
 
Protein sequence
MKKFWRGRRA GTEFTVSGDP FGYSVDTKAR VPLQAWSERL ASRISMPEDQ QHMLEDLARR 
GTVVYAVKYR SQLDFVYLNL RLHQLGLPPA SFLFDLHPYF YQPRWYALKL LAFHFYHLIR
RGELPNPYDS GHYREKIKKG ESGLLFLLGK RGYYRRAVLV GNDPLELLLE VQRETDRPIF
VVPIMLLYTR HPGRERKGML EVFLGQREQP GHLRKLVAFF RGSPNCVMEA GEALNLQEVL
PELAEGPYHR RKQVFEIRRG LIDSVDEIKR AVVGPTLKSK LELKEIILHH PRLDAFMQRR
ARSQNQEIWR VRKEADDYLE EIAANYSTTL IQVGEKTLNW VWNNLFDGIE VDVDSLQKVK
RAARHDTLVY IPCHKSHIDY LVLSCILFQN NLTCPFIAAG KNLSFWPLGP VFRRGGAFFI
RRSFKGLKFY SEVFSLYVKT MVQLGHNIEF FIEGGRSRTG KMVLPKLGLL AILIQAVEDE
FLDDLVFVPT SISYDRIPEE ESYTKEVAGG SKVEENIRQL VRARGFLKKR YGRIYVTFAE
PVSLQRYLER YRGDSTKLLP KERHAMYRDF GYRIINSINQ ATLVTPHALA ASALLTSERH
GVSKAEFHEV CDMFHGYLNN CGVKLSKTLR NYQASLQDTL WDLERGKIIG KLKDEDDDLE
EEVFTMDDSK RLLLEYYKNN LIHFLLPPAY VATSILSQQT FRFSISQVVE DVAFMKNFFK
FEFVYDNEVS DEKLVEGVLD SFNTLGWLHL LGEEDQPYTL SHRGQQAAHS FHGLLRNYFE
GYWLVLRATR YLQKKPYTER DFIKKVLSLG QKALKLELVE RPECISKMIF GNALKFYVEK
NIIEKVDCDK GKEKEQECYT DAGNRALIQH YSKQISRFLR SPHFALQ