Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3097 |
Symbol | |
ID | 4458577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3805467 |
End bp | 3808130 |
Gene Length | 2664 bp |
Protein Length | 887 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639703868 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_847205 |
Protein GI | 116750518 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2937] Glycerol-3-phosphate O-acyltransferase |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.189934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAGT TCTGGCGGGG TCGGCGTGCG GGGACGGAGT TCACCGTTTC GGGCGACCCT TTTGGTTATT CGGTCGACAC GAAAGCCAGG GTTCCGCTTC AGGCCTGGAG CGAGCGTCTC GCTTCCCGCA TTTCCATGCC GGAAGACCAA CAGCACATGC TCGAAGATCT GGCGCGGCGC GGCACCGTTG TCTATGCGGT CAAGTACCGT TCGCAACTGG ATTTCGTGTA CCTGAATCTG AGGTTGCACC AGCTTGGTTT GCCTCCGGCA TCCTTTCTGT TCGATCTGCA TCCATACTTC TACCAGCCGC GCTGGTATGC CCTGAAGCTG CTGGCCTTCC ATTTCTACCA CCTGATACGC AGGGGGGAGC TTCCGAATCC TTACGACAGC GGGCACTACC GTGAGAAAAT AAAAAAAGGC GAATCGGGTT TGCTCTTTTT GCTGGGCAAG AGGGGGTACT ACCGCCGGGC CGTGCTCGTT GGAAACGACC CCCTGGAGCT GCTGCTCGAG GTTCAGCGGG AGACCGATCG CCCCATATTC GTCGTGCCGA TCATGCTGCT CTATACCCGG CATCCGGGCA GGGAACGCAA GGGGATGCTC GAGGTGTTCC TCGGTCAGAG AGAGCAGCCG GGGCATTTGC GCAAACTCGT GGCGTTCTTT CGCGGTTCTC CGAATTGCGT GATGGAAGCC GGGGAAGCTC TGAACCTGCA GGAAGTGCTG CCCGAGCTGG CGGAGGGGCC GTACCACAGG CGCAAGCAAG TTTTCGAGAT CCGTCGTGGC TTGATCGATT CGGTGGATGA GATCAAACGG GCGGTGGTGG GCCCCACGCT GAAGAGCAAG CTCGAGTTGA AGGAGATCAT CCTGCACCAC CCGCGCCTGG ATGCTTTCAT GCAGCGGCGA GCCCGTTCGC AGAACCAGGA GATCTGGAGG GTCCGCAAGG AGGCCGACGA CTACCTCGAG GAAATCGCGG CCAATTACAG CACCACCCTC ATTCAGGTCG GGGAGAAGAC CCTCAACTGG GTCTGGAACA ACCTGTTCGA CGGGATCGAA GTGGATGTCG ACAGCCTGCA GAAGGTGAAG CGGGCCGCGC GGCACGACAC TCTCGTCTAC ATACCGTGTC ACAAGAGTCA TATCGACTAC CTGGTGCTCT CGTGCATTCT GTTTCAGAAC AACCTGACCT GTCCGTTCAT CGCCGCGGGG AAGAACCTGT CCTTCTGGCC GCTGGGACCG GTCTTCCGAA GAGGGGGTGC CTTCTTCATC CGCCGCAGTT TCAAGGGCCT GAAGTTCTAT TCCGAGGTGT TTTCGCTCTA TGTGAAGACC ATGGTGCAAC TGGGGCACAA CATAGAGTTC TTCATCGAAG GAGGGCGCAG CCGCACGGGG AAAATGGTCC TGCCCAAGCT CGGGTTGCTC GCCATCCTGA TCCAGGCGGT CGAGGACGAA TTCCTGGACG ATCTGGTTTT CGTGCCCACA TCCATCAGCT ACGATCGGAT TCCGGAGGAG GAATCCTACA CCAAGGAAGT TGCGGGCGGG AGCAAGGTCG AGGAGAATAT TCGTCAACTG GTTCGTGCCA GGGGATTTCT CAAGAAACGG TATGGGCGCA TCTACGTCAC TTTCGCCGAG CCCGTTTCCC TGCAGCGCTA CCTCGAACGT TACCGGGGAG ACTCCACGAA GCTGTTGCCC AAGGAACGGC ACGCCATGTA CCGGGATTTC GGCTACCGGA TCATCAACAG CATCAATCAG GCCACCCTGG TGACCCCTCA TGCCCTGGCC GCTTCGGCCC TGTTGACGTC GGAGCGGCAC GGAGTTTCGA AGGCGGAATT CCACGAGGTC TGTGATATGT TCCACGGTTA CCTGAACAAC TGCGGGGTGA AGCTTTCGAA GACGTTGCGC AACTACCAGG CGAGCCTCCA GGATACGCTC TGGGACCTCG AACGGGGTAA GATCATCGGG AAGCTCAAGG ATGAAGACGA CGACCTCGAG GAAGAAGTCT TCACCATGGA CGACAGCAAG CGCCTTCTGC TCGAGTATTA CAAGAACAAT CTGATCCATT TTCTGCTGCC CCCGGCTTAT GTCGCCACCT CGATCCTGTC GCAGCAGACG TTTCGTTTCA GCATTTCCCA GGTCGTGGAA GATGTCGCGT TCATGAAAAA CTTCTTCAAG TTCGAATTCG TATACGACAA TGAAGTGAGC GACGAGAAGC TGGTGGAGGG GGTCCTCGAC AGCTTCAACA CCCTGGGTTG GCTGCACCTC CTGGGCGAGG AAGATCAGCC TTACACGCTG TCTCATAGAG GCCAGCAGGC CGCTCATTCC TTCCACGGCC TGTTGCGCAA CTACTTCGAG GGCTACTGGC TGGTGCTGAG GGCGACACGC TACCTGCAGA AGAAACCGTA TACGGAAAGA GATTTCATCA AGAAGGTTCT CTCCCTGGGA CAGAAGGCTC TGAAGCTGGA ACTGGTGGAG CGCCCCGAGT GCATTTCCAA GATGATTTTC GGGAACGCGC TGAAATTTTA TGTCGAAAAG AACATCATCG AAAAGGTCGA CTGCGACAAG GGCAAGGAAA AAGAGCAGGA ATGCTATACG GATGCGGGCA ACCGGGCACT GATACAACAC TACAGCAAGC AGATCAGCCG TTTCCTCCGG TCGCCTCATT TCGCGCTCCA ATAG
|
Protein sequence | MKKFWRGRRA GTEFTVSGDP FGYSVDTKAR VPLQAWSERL ASRISMPEDQ QHMLEDLARR GTVVYAVKYR SQLDFVYLNL RLHQLGLPPA SFLFDLHPYF YQPRWYALKL LAFHFYHLIR RGELPNPYDS GHYREKIKKG ESGLLFLLGK RGYYRRAVLV GNDPLELLLE VQRETDRPIF VVPIMLLYTR HPGRERKGML EVFLGQREQP GHLRKLVAFF RGSPNCVMEA GEALNLQEVL PELAEGPYHR RKQVFEIRRG LIDSVDEIKR AVVGPTLKSK LELKEIILHH PRLDAFMQRR ARSQNQEIWR VRKEADDYLE EIAANYSTTL IQVGEKTLNW VWNNLFDGIE VDVDSLQKVK RAARHDTLVY IPCHKSHIDY LVLSCILFQN NLTCPFIAAG KNLSFWPLGP VFRRGGAFFI RRSFKGLKFY SEVFSLYVKT MVQLGHNIEF FIEGGRSRTG KMVLPKLGLL AILIQAVEDE FLDDLVFVPT SISYDRIPEE ESYTKEVAGG SKVEENIRQL VRARGFLKKR YGRIYVTFAE PVSLQRYLER YRGDSTKLLP KERHAMYRDF GYRIINSINQ ATLVTPHALA ASALLTSERH GVSKAEFHEV CDMFHGYLNN CGVKLSKTLR NYQASLQDTL WDLERGKIIG KLKDEDDDLE EEVFTMDDSK RLLLEYYKNN LIHFLLPPAY VATSILSQQT FRFSISQVVE DVAFMKNFFK FEFVYDNEVS DEKLVEGVLD SFNTLGWLHL LGEEDQPYTL SHRGQQAAHS FHGLLRNYFE GYWLVLRATR YLQKKPYTER DFIKKVLSLG QKALKLELVE RPECISKMIF GNALKFYVEK NIIEKVDCDK GKEKEQECYT DAGNRALIQH YSKQISRFLR SPHFALQ
|
| |