Gene Sfum_3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3091 
Symbol 
ID4458571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3799957 
End bp3800433 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content59% 
IMG OID639703862 
Producthypothetical protein 
Protein accessionYP_847199 
Protein GI116750512 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.768762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00083332 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGGACA AAACCAAAAC GAACGTTTCT CCATCGATGG GGCCGCACCG CTTCGAAATG 
GGTGCCTGGA TCAGCTGTGC GCCTTTTGAG CGCCTGCTGA ATATCGAGAT CGCGGAAGCT
TCCGACGGCC GTGCGGTCTT GAGGATGCCT TTCTTCATCG AATACGCCCA GGGCGGGGGG
CTGATGCACG GCGGCGCCCT GGTGAGCCTG GCCGACACGG CGGTGGTCAT GGCCATCAAG
AGCCTGGTTC CCGAACTATC CCATTTTGCG ACCATCACCA TGGAAACGAA GTTCCTCCTG
CCGGTCAAAC GGGGAATTGT CACGGCGAGA GCGGAGGTGA TCGAGCGCGA AGGCCGACTA
CTCAAAGGCC GGGCAACCGT CTATGATGAG CAGGATCGAG TGGTGATGGA GTTTGCGTCT
CTTTTCAAGA TGGCCAGGGA CACCAGGATC AGGGGGATCA CATTCATCGG GGCTTGA
 
Protein sequence
MPDKTKTNVS PSMGPHRFEM GAWISCAPFE RLLNIEIAEA SDGRAVLRMP FFIEYAQGGG 
LMHGGALVSL ADTAVVMAIK SLVPELSHFA TITMETKFLL PVKRGIVTAR AEVIEREGRL
LKGRATVYDE QDRVVMEFAS LFKMARDTRI RGITFIGA