| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3088 |
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| Symbol | |
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| ID | 4458568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3796758 |
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| End bp | 3797822 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639703859 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_847196 |
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| Protein GI | 116750509 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.675437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000126154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGTCCATCG ACAGCACCGT CAAATTACTG GAGTCCGGAG GCCGTCTTCT TTTCGAGGAC
GCCGCGGAGC TCTACGAGAA GGCGGACTTT CACCTCCTCG GGCGCCTGGC TCACGCGCGC
AGGCTGGAGA AGTGTCCCGC GCCCGTGGTG ACTTACGTTA TCGACCGGAA CATCAACTAT
TCGAACATAT GCGTGTGCGG ATGCCGCTTC TGCGCGTTCT TCCGGGCTCC CGGTCAGGAC
GGAGGCTACC TGCTCACCCA CGGGGAGCTG GCGGCCAAGA TCGAGGAAAC CCTGGCTCTC
GGGGGCACGC AGATCCTCAT GCAGGGCGGG CACCATCCCG ATCTGCCATT GGCCTGGTAC
GAAGAAACGC TGCGATTCAT CAAGAATCGC TACCCCATTC ACGTTCATTC GTTCTCCCCG
CCCGAAATCG TTCATTTCAG CCGGATCGAG CGGACGGACG TCGGGACGGT CATCCGCCGC
CTGAGGGAAG CGGGGCTCGA TTCGATACCC GGCGGGGGAG CCGAGATACT GGTGGATTCG
ATCCGCCGGA GCGTTTCTCC GAACAAGTGC TCGGCGCGGG AATGGCTGGA CGTCATGGAA
GAGGCGCACC ACCAGGGGCT TCGCACCACC GCCACGATGA TGTTCGGCCA CGAGGAGGAA
CCCCGCCACC GCCTGGAACA CCTGTTTGCG TTGCGGGAGT TGCAGGATCG CACAGGCGGA
TTCACCGCCT TCATTCCATG GGCTTTTCAG CCGATGAACA CCAACATCCC CGGACCGCCC
GCTACGGCGA CGGCCTATCT GCGACTCCTG GCCGTTTCCC GGCTGGTCCT GGACAACTTT
GACAACGTGC AGGCATCCTG GGTCACCATG GGGCCCAAGA TCGCGCAGCT GTCCCTTTTT
TTCGGCGCCA ACGATTTCGG CTCGACGATG ATCGAGGAGA ACGTCGTGGC CGCGGCCGGA
GTTCACTTTC GACTGTCCGT GGGGGAAATC CGGCGGCTCA TACGGTCCGC CGGATTTGAG
CCGCGGCAGA GGAACATGGC CTATGAGCGC GTTGAATCCC CTTGA
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| Protein sequence | MSIDSTVKLL ESGGRLLFED AAELYEKADF HLLGRLAHAR RLEKCPAPVV TYVIDRNINY
SNICVCGCRF CAFFRAPGQD GGYLLTHGEL AAKIEETLAL GGTQILMQGG HHPDLPLAWY
EETLRFIKNR YPIHVHSFSP PEIVHFSRIE RTDVGTVIRR LREAGLDSIP GGGAEILVDS
IRRSVSPNKC SAREWLDVME EAHHQGLRTT ATMMFGHEEE PRHRLEHLFA LRELQDRTGG
FTAFIPWAFQ PMNTNIPGPP ATATAYLRLL AVSRLVLDNF DNVQASWVTM GPKIAQLSLF
FGANDFGSTM IEENVVAAAG VHFRLSVGEI RRLIRSAGFE PRQRNMAYER VESP
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