Gene Sfum_3077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3077 
Symbol 
ID4458592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3786741 
End bp3787373 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content58% 
IMG OID639703848 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_847185 
Protein GI116750498 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000136505 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000844821 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCTCAAAG GGACCCCCAT TGAGACCGGC TACTACAACC TGTTGGAACG TCTCATCGTT 
CCGAAGCTCG TGCGTTTCCA CCTCACGCCC AACCACATTT CCCTCATGGG GCTGGTTACG
AGCATGCTGG CCGGGCTCGC GTTCGTTTTC TTCCCCCTGG TGGGCGGAAT CCTGACTTTG
CTCACGGGGT TGCTGGATAC TCTGGACGGT TCGCTGGCAA GGGCCACCGG ACAGAGCAAG
AAATTCGGGG CCTTTCTCGA TTCCATCCTG GATCGCTACA CCGAGCTCAT CATCTACCTG
GGCATCTGGA CCTATTTCTA CAGACAGGAT GCCAAGACAC CCTTCTTCTC CCTGCTGATC
CTGTTGATCC TGTTCGGTTC GCTCATGGTG AGCTATACAA GAGCCAGAGC GGAAGGGCTC
GGAGAACGCT GCCTGGTGGG TTTCTTTCAG AGGGGGGAAA GGATCATTCT GCTGGGCCTG
TCCGGCATTC TGAATCCTTT CGTGAATCTG ATCGCGAGCT CCGGGTGGAC TCGCGACCTG
ATGCTCTTTG CCGGACTCCT GATCCTGGCC GTCGGCACCA ATTTGACGGC CCTCTGGCGG
TTCCTGCACG TGCTGAACAA GCTGCGCCCC TGA
 
Protein sequence
MLKGTPIETG YYNLLERLIV PKLVRFHLTP NHISLMGLVT SMLAGLAFVF FPLVGGILTL 
LTGLLDTLDG SLARATGQSK KFGAFLDSIL DRYTELIIYL GIWTYFYRQD AKTPFFSLLI
LLILFGSLMV SYTRARAEGL GERCLVGFFQ RGERIILLGL SGILNPFVNL IASSGWTRDL
MLFAGLLILA VGTNLTALWR FLHVLNKLRP