Gene Sfum_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3070 
Symbol 
ID4458585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3779062 
End bp3780999 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content60% 
IMG OID639703841 
Productacetyl-CoA hydrolase/transferase 
Protein accessionYP_847178 
Protein GI116750491 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000155657 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAAACT CCGATACGGA AGCAGGAAAT GAAAGCCGGG GAGCCTTCGA GTTCTCTTCG 
CCGCTTTCCT GGCGCTCTCT TTACAAAGAG CGACTGACTA CCGCCGAGCG GGCCATTGAA
GCTATAAAGC GGGGGCATCG GGTCTTCATC GGTTCGGGGT GCAGCGAGCC CCAGCACCTG
GCCCAGGCCC TGGAAGAAGC CATTCCCTTG CTGGCGGACC TCGAGATCCT GCACATCCTG
AGTGTGGGCA AGACGCGCTA CACGGAAGCG GGATTCGACA AGTGCCGCCT GAAGTCGTTC
TTCGTGGCGT CGGCCAGCCG CGAAGCCGTG GCCCAGGGCA GAGCCGACTA CACTCCGATC
AATCTCGGGG ACGTTCCGGC GCTGTTCCGC AGCGGCGCGA TGCCCATCGA CGTGGCGCTC
ATCCAGGTTT CCCCTCCCGA CGAACACGGG TTTTGCAGCT ACGGTATCGC GGTGGACATC
GTGAAGGCGG CGGTGGAGAG CGCCAGGCTC GTGATCGCCC AGGTCAATCC TCAAATGCCG
ATGACGCTCG GGGACAGTTT CATCCACATC CGCGATATCC ACGTTCTGGT CGAACACGAG
GAACCGCTGC TCGAAGTCGG CCTGCCGCTC ATGAACCCGA TCGCCCAGGA CATCGGCCGG
CATGTGGCCA CGCTCATCGA AGACGGCTCC ACCATTCGCG TCGGGGTGGG CAGCATATCC
ACCGCGGTCT TGTACGCCCT CGAGAACAAA AAGGATCTCG GGGTTCATGC GGACATGATC
ACGGACGCTT ACATGCACCT GGTCAAGAAG GGGGTCATCA CCAATGCCCG CAAGACCCTG
CACCCGGGGA AGATCGTCAC GAGCTTCTGT CTGGGTTCGA GGGAACTCTA CGATTTCGTG
GACAACAACC CGATGGTGGC CTTCCATCCG ATCGAGTACA CGAACAACTA CCTGGTCATA
TCGGAAAACG ACCAGATGGT GTCCATCAAC CCGGGGCTCG AAGTGGATCT CACGGGCCAG
GTCTGTTCGG ATTCCATGGG ATATGAAATC TACAGCGGCG TCGGCGGAGC GATCGATTTC
CTGCGGGGAG CCCGGGGGTC GCGCGGCGGG AAGGCGATCA TGGTTCTCCC TTCAACGACG
CTTGACGGAA GCACATCGAG AATCGTGCCG GTCCTGACGG AGGGGTCGGG CGTCGTGATG
ACTCGCGGCG GGGTGCAGTA CGTGGTGACC GAGTACGGGT CGGCGTATCT TTTGGGGAGG
AGTACCCGCG AGCGGGCCCT GGCCCTGATC GGCATCGCTC ATCCCGACTT TCGCGAGGAA
CTGATGGAAG CCGCCGAGAC GTTGAATTAC CTGCAGGCCG ACGTGTCGCG GGGGCCCAGC
ACCAGGGCCG TATACCCCCT CGACTGGGAA GTGTCCCATT CGTTCGACAT TCAATCGAAA
GTCTTTATCA GACCCGTCAA ACCCACCGAC GAGCGCGCGA TAAAGGAGTT TTTCTACTCA
CTGCCCAAGA GCGAGAGCTA CATCCGTTTC TTGTCGGTAA TGAAGGTTTT CCCGCACTAC
GATGTCCGAA GCATGGTGAA CATCGATTAT CGGAGGGAGA TGAGCCTCAT CGCCCTGGTG
GGAGAAATGT CCTCGCAGCG GGTGGTTGCC ATCGCGCGAT ATGTTCTGGA TGAGGCGACC
ATGACCGCCG AGGTTGATTT CGCCGTGCAT CCCGAACACA GCCGTCAGGG ACTTGCCACG
GTCCTCGTGC ACCACATGGC GGAAGGGGCC CGCAAAAATG GCGTAAAGAG ACTGGTCGCT
TACATTTCCG CCGGAAATGA ACGGGTTTTC GGAGTCTTCC AAAAAACCGG CTTCTTGGTC
CAGAGCTCGT TCCGGGAAGG TGTTTACGAA ATACGGGTCG ATCTCCAGGA GCGCGCCCAG
GTCTGTCTGC TCCTCTGA
 
Protein sequence
MRNSDTEAGN ESRGAFEFSS PLSWRSLYKE RLTTAERAIE AIKRGHRVFI GSGCSEPQHL 
AQALEEAIPL LADLEILHIL SVGKTRYTEA GFDKCRLKSF FVASASREAV AQGRADYTPI
NLGDVPALFR SGAMPIDVAL IQVSPPDEHG FCSYGIAVDI VKAAVESARL VIAQVNPQMP
MTLGDSFIHI RDIHVLVEHE EPLLEVGLPL MNPIAQDIGR HVATLIEDGS TIRVGVGSIS
TAVLYALENK KDLGVHADMI TDAYMHLVKK GVITNARKTL HPGKIVTSFC LGSRELYDFV
DNNPMVAFHP IEYTNNYLVI SENDQMVSIN PGLEVDLTGQ VCSDSMGYEI YSGVGGAIDF
LRGARGSRGG KAIMVLPSTT LDGSTSRIVP VLTEGSGVVM TRGGVQYVVT EYGSAYLLGR
STRERALALI GIAHPDFREE LMEAAETLNY LQADVSRGPS TRAVYPLDWE VSHSFDIQSK
VFIRPVKPTD ERAIKEFFYS LPKSESYIRF LSVMKVFPHY DVRSMVNIDY RREMSLIALV
GEMSSQRVVA IARYVLDEAT MTAEVDFAVH PEHSRQGLAT VLVHHMAEGA RKNGVKRLVA
YISAGNERVF GVFQKTGFLV QSSFREGVYE IRVDLQERAQ VCLLL