Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3063 |
Symbol | |
ID | 4458613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3771064 |
End bp | 3772380 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639703835 |
Product | carboxyl-terminal protease |
Protein accession | YP_847172 |
Protein GI | 116750485 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0122157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAGA AGCGCGCCAA AGTCATCGTA TTGCTCGCTG CGTTTGCCTT TCTGCTCATG AGTTATTCCG GTCTGAGAGC GGCCAGGAAC AGCCCTGACA ATTCCGACAT GTATCAGTAC TTGAAGCTCT TCAGCGACGT GTTGAACATC GTTCAGGACA ACTACGTCGA GAAGGTTGAC ACAAAGAAAT TGATGTACGG GGCCGTCAAC GGCATGCTCC GGGAACTCGA TCCTCATTCT TCGTTTCTGC GTCCCGAAGA CTACAAGGAA CTGCAGATAG AAACCAAAGG GAAGTTCGGC GGCCTGGGAA TCGAAATCAC CATGCGCGAC AACGTGTTGA CCGTCGTCGC GCCCCTTGAG GACACGCCCG CGGATCGTGC GGGGGTACTG GCCAATGACC AGATTGTCAA GATCGACGAC CAGCCGACCC AGGACATGTC CCTCATGGAC GCCGTGCAGA AAATGCGGGG TCCCAAGGGA ACCAAGGTCA GGCTGACCAT TATCCGCAAA GGCGAAAAGA AGCCTCTCGA ATTCGAGCTC ACCCGGGACA TCATTGCAAT ACAGAGCGTG AAGTACCGGA CGCTGGAATC GGGTTACGGC TATGTGAGGA TCACGAGTTT CCAAAGCGGG ACAGCCAATG ATCTGCGCAA GGCTCTGGAA CACCTGGAAA ATGACAACCA CCCGCTTCAG GGCCTCGTGC TCGATCTGCG CAACGACCCG GGAGGACTCC TGGATCAGGC GGTCGAGGTG AGCGACGAAT TCATCGATGA AGGCCTTATC GTATACACGG GCGGGCGCCT GGAGAGTCAG AAGATGCGCT TTGAGGCGCA CAAGGGAACC AAGGCGCACG GCTACCCGAT GGTCGTTCTG GTGAATTCGG GGAGCGCCAG CGCGTCGGAA ATTGTGGCCG GGGCGCTTCA GGACCACAAA CGTGCCATCA TTCTCGGTGA ACCCACGTTC GGGAAGGGTT CCGTTCAGAC GGTCATCCCT CTCAACGACG GCTCGGCGCT TCGCCTGACC ACCTCGCTGT ACTACACGCC ATCGGGCAGA TCCATTCAGG CCAAGGGGAT CGAGCCTGAC ATCGTGGTCA AGCGCGAGAC CCCGCAAAAG GGGGAAGAGC CGGTCGGCGA CGAGTTGCGC CGCATTCGGG AAAAGGATCT GCCGCGGCAC ATGGAGAATC AGAAACCCGA TTCCGGCGGC GTCAAGCCGG AAAGCATTCC CATGGATTCC AAGCTGATCG ATCAGGACAA CCAGCTCAGA AGGGCGCTGG ATCTTCTGAA AAGTTACAAA ATCATGGCCC AGATGCAGTT CAATTAA
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Protein sequence | MSKKRAKVIV LLAAFAFLLM SYSGLRAARN SPDNSDMYQY LKLFSDVLNI VQDNYVEKVD TKKLMYGAVN GMLRELDPHS SFLRPEDYKE LQIETKGKFG GLGIEITMRD NVLTVVAPLE DTPADRAGVL ANDQIVKIDD QPTQDMSLMD AVQKMRGPKG TKVRLTIIRK GEKKPLEFEL TRDIIAIQSV KYRTLESGYG YVRITSFQSG TANDLRKALE HLENDNHPLQ GLVLDLRNDP GGLLDQAVEV SDEFIDEGLI VYTGGRLESQ KMRFEAHKGT KAHGYPMVVL VNSGSASASE IVAGALQDHK RAIILGEPTF GKGSVQTVIP LNDGSALRLT TSLYYTPSGR SIQAKGIEPD IVVKRETPQK GEEPVGDELR RIREKDLPRH MENQKPDSGG VKPESIPMDS KLIDQDNQLR RALDLLKSYK IMAQMQFN
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