| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3063 |
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| Symbol | |
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| ID | 4458613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3771064 |
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| End bp | 3772380 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639703835 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_847172 |
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| Protein GI | 116750485 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0122157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAGA AGCGCGCCAA AGTCATCGTA TTGCTCGCTG CGTTTGCCTT TCTGCTCATG
AGTTATTCCG GTCTGAGAGC GGCCAGGAAC AGCCCTGACA ATTCCGACAT GTATCAGTAC
TTGAAGCTCT TCAGCGACGT GTTGAACATC GTTCAGGACA ACTACGTCGA GAAGGTTGAC
ACAAAGAAAT TGATGTACGG GGCCGTCAAC GGCATGCTCC GGGAACTCGA TCCTCATTCT
TCGTTTCTGC GTCCCGAAGA CTACAAGGAA CTGCAGATAG AAACCAAAGG GAAGTTCGGC
GGCCTGGGAA TCGAAATCAC CATGCGCGAC AACGTGTTGA CCGTCGTCGC GCCCCTTGAG
GACACGCCCG CGGATCGTGC GGGGGTACTG GCCAATGACC AGATTGTCAA GATCGACGAC
CAGCCGACCC AGGACATGTC CCTCATGGAC GCCGTGCAGA AAATGCGGGG TCCCAAGGGA
ACCAAGGTCA GGCTGACCAT TATCCGCAAA GGCGAAAAGA AGCCTCTCGA ATTCGAGCTC
ACCCGGGACA TCATTGCAAT ACAGAGCGTG AAGTACCGGA CGCTGGAATC GGGTTACGGC
TATGTGAGGA TCACGAGTTT CCAAAGCGGG ACAGCCAATG ATCTGCGCAA GGCTCTGGAA
CACCTGGAAA ATGACAACCA CCCGCTTCAG GGCCTCGTGC TCGATCTGCG CAACGACCCG
GGAGGACTCC TGGATCAGGC GGTCGAGGTG AGCGACGAAT TCATCGATGA AGGCCTTATC
GTATACACGG GCGGGCGCCT GGAGAGTCAG AAGATGCGCT TTGAGGCGCA CAAGGGAACC
AAGGCGCACG GCTACCCGAT GGTCGTTCTG GTGAATTCGG GGAGCGCCAG CGCGTCGGAA
ATTGTGGCCG GGGCGCTTCA GGACCACAAA CGTGCCATCA TTCTCGGTGA ACCCACGTTC
GGGAAGGGTT CCGTTCAGAC GGTCATCCCT CTCAACGACG GCTCGGCGCT TCGCCTGACC
ACCTCGCTGT ACTACACGCC ATCGGGCAGA TCCATTCAGG CCAAGGGGAT CGAGCCTGAC
ATCGTGGTCA AGCGCGAGAC CCCGCAAAAG GGGGAAGAGC CGGTCGGCGA CGAGTTGCGC
CGCATTCGGG AAAAGGATCT GCCGCGGCAC ATGGAGAATC AGAAACCCGA TTCCGGCGGC
GTCAAGCCGG AAAGCATTCC CATGGATTCC AAGCTGATCG ATCAGGACAA CCAGCTCAGA
AGGGCGCTGG ATCTTCTGAA AAGTTACAAA ATCATGGCCC AGATGCAGTT CAATTAA
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| Protein sequence | MSKKRAKVIV LLAAFAFLLM SYSGLRAARN SPDNSDMYQY LKLFSDVLNI VQDNYVEKVD
TKKLMYGAVN GMLRELDPHS SFLRPEDYKE LQIETKGKFG GLGIEITMRD NVLTVVAPLE
DTPADRAGVL ANDQIVKIDD QPTQDMSLMD AVQKMRGPKG TKVRLTIIRK GEKKPLEFEL
TRDIIAIQSV KYRTLESGYG YVRITSFQSG TANDLRKALE HLENDNHPLQ GLVLDLRNDP
GGLLDQAVEV SDEFIDEGLI VYTGGRLESQ KMRFEAHKGT KAHGYPMVVL VNSGSASASE
IVAGALQDHK RAIILGEPTF GKGSVQTVIP LNDGSALRLT TSLYYTPSGR SIQAKGIEPD
IVVKRETPQK GEEPVGDELR RIREKDLPRH MENQKPDSGG VKPESIPMDS KLIDQDNQLR
RALDLLKSYK IMAQMQFN
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