Gene Sfum_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3056 
Symbol 
ID4458606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3763765 
End bp3764946 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content62% 
IMG OID639703828 
Productradical SAM domain-containing protein 
Protein accessionYP_847165 
Protein GI116750478 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.228039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGTA TTTCAAAGCT TTACTGTGGA ACCGTTGAGC CCTCCGATGC CCTTCGCTAC 
GGGCGACACA GCGGGCAACT GCCTTCCCAC CTGCTGCAAT TTTCCATCGA CAAGAAACCG
GTCGTCGTCT GGAACGTAAC ACGGCGCTGC AATCTGCGAT GCGTGCACTG TTACGCCCAT
GCCCGGGACC AGGTTTTTCC CGATGAGATG ACCGGCGCCG AGGGGAAAAA GGTCCTGGAT
GACCTGGCGC AATTCGGAAC GCCCGTGGTG CTCTTTTCGG GCGGGGAGCC GCTGATGCGC
CCCGACCTGG TCGAGTTGGC CGCCTATGCG GTCGAAAAGG GAATGCGGGC GGTGATCTCG
ACCAACGGGA CGCTCATCAC TCCCGCGGTC GCCCGCGAGC TCAAGACCGT GGGCCTGTCC
TATGTCGGCA TCAGCCTTGA CGGCATGGAG CCGGTCAACG ACCGTTTCCG CGGTGTGAAG
GGGGCTTTTC GGATGGCGCT GGACGGGATA ACCGCTTGCC GGGAAGCGGG AATCAAGGTG
GGGTTGCGCT TTACCATGAA CCGCCTGAAC GCGCGCGAAA TTCCGGCTGT GTTCGATCTG
CTGGAAGCAC GGGACATCCC GCGGGTCTGT TTCTACCACC TCGTTTACGC CGGACGCGGC
ACCAAGCTCA TGGAGGAGGA CCTCTCCCAT GAGGAGACCC GCGCCGCGGT GGACCTCATC
ATCGACCGGA CCAGGGACCT GCACGAGCGC GGCAAGCCCA AGGAGGTTCT GACCGTCGAC
AACCATGCGG ACGGCCCCTA CCTCTACCTG AGAATGCTGC GTGAAGGATC GACGAGAGCT
TCCGAGGTGC TGGAGTTGCT GCAGATGAAC GAAGGCAACA ACTCGGGCCG GGGAATCGGG
TGCATCAGTT GGGACGGCAG CGTGCACGCC GACCAGTTCT GGCGCCACTA TTCCTTCGGC
AATGTGCGGC AGAGGCCTTT CAGCGAAATC TGGACGGACG TCTCCAACCC CCTTATGAAT
CAGCTCAAGG ACAAGAAGCT CCATGTGAAG GGCCGATGTG CCGAATGCCG TTGGCTCGGG
GTCTGCGGGG GGAATTTCCG GGTGCGCTCG GAAGCTGCCA CCGGCGATCT GTGGGCGCCG
GACCCCGCCT GCTATCTGAC GGAACGGGAG ATTGCCGGGT AG
 
Protein sequence
MIGISKLYCG TVEPSDALRY GRHSGQLPSH LLQFSIDKKP VVVWNVTRRC NLRCVHCYAH 
ARDQVFPDEM TGAEGKKVLD DLAQFGTPVV LFSGGEPLMR PDLVELAAYA VEKGMRAVIS
TNGTLITPAV ARELKTVGLS YVGISLDGME PVNDRFRGVK GAFRMALDGI TACREAGIKV
GLRFTMNRLN AREIPAVFDL LEARDIPRVC FYHLVYAGRG TKLMEEDLSH EETRAAVDLI
IDRTRDLHER GKPKEVLTVD NHADGPYLYL RMLREGSTRA SEVLELLQMN EGNNSGRGIG
CISWDGSVHA DQFWRHYSFG NVRQRPFSEI WTDVSNPLMN QLKDKKLHVK GRCAECRWLG
VCGGNFRVRS EAATGDLWAP DPACYLTERE IAG