Gene Sfum_3039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3039 
Symbol 
ID4458624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3746821 
End bp3747081 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content54% 
IMG OID639703811 
Productribosomal protein S16 
Protein accessionYP_847148 
Protein GI116750461 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000430382 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.865632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTGC GTATACGTTT GGCACGTGGA GGAAGAAAGA AAAGGCCTTT CTACAGGATC 
GTGGTCGCGT CATCCGAGGC GCCTCGAGAC GGTCGTTTCA TTGAACGCAT TGGTACCTAC
AACCCCTTGC CGGACACGGC CGAAGTGAAA ATCGATTCCG ACAGGCTTCA GTATTGGCTT
CAGCAGGGTG CGAAACCCAC CGACACGGTG CGCAATCTGA TTCAGAAATA TGGTGGACAA
GCAGTCACTG AAGCCTCGTA G
 
Protein sequence
MAVRIRLARG GRKKRPFYRI VVASSEAPRD GRFIERIGTY NPLPDTAEVK IDSDRLQYWL 
QQGAKPTDTV RNLIQKYGGQ AVTEAS