Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3031 |
Symbol | |
ID | 4458651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3736062 |
End bp | 3737135 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639703803 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_847140 |
Protein GI | 116750453 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.606792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAG GAAAAGCATA TCGCATTGCG GTGATTCCCG GAGACGGCAC AGGGCCGGAA GTGGTCCGGG AAGGGCTCAA GGCGCTCGAC GCGGTCGCCG CCGTGAAGGG CTTCAAGGTG GAGAAGGTGC ATTACGACCT GGGCGGCGAG AGGTACCTGA AGACCGGGGA TATCCTCCCG CAGGGAGTTC TCGATGAATT GCGGACTTTC GACGCCATTC TGCTCGGCGC GATAGGACAT CCCGACGTCA AGCCGGGAAT CCTGGAAAAA GGGCTTCTGC TGGAGCTGCG GTTCCAACTG GACCAGTACA TCAACCTGCG TCCGGTCATC CTGTATCCCG GGGTGGAGAC TCCCCTCAAG GACAAGAGGC CCGAGGACAT CGACTTCGTC GTTGTGCGCG AGAACACCGA AGGGCTGTAC GCCGGTTCGG GCGGTTTTCT ACGCAAGGGG ACGCCTCACG AGGTGGCGAT CCAGGAATCG ATCAACACGC GCGTGGGCGT CGAGCGTTGC ATCCGCTTCG CGTTTGACTT CTGCCGCCGG AGGAACGCCG GGAAAAAGTT GACCTTGTGC GGCAAGACGA ACGTCCTGAC CTATGCCTTC GACCTCTGGC AGCGCGTGTT CAACGAAGTG GCGGGGGAAT ACCCGGATAT CGGGACCGAC TACGCCCATG TGGATGCGAC GTGCATGTGG ATGGTGAAAA ACCCCGAGTG GTTTGACGTC ATCGTGACGG ACAACATGTT CGGGGACATC ATCACCGACC TCGGGGCCAT GATCCAGGGC GGGATGGGAA TTGCCGCGGG CGGCAACATC AATCCTTCGG GCGTGTCCAT GTTCGAGCCC ATCGGCGGGT CCGCGCCCAA ATACACCGGG CAAAACGTCA TCAATCCCCT GGCGGCCGTC GCCGCGGTGC AAATGATGTT GGACCATCTG GAAGAGCGCC CTGCCGCGGC GCTGATCGAG AAGGCCATCA AGAAGGTGGT GGCGCGGGAC ATCAAGAGCC TGTCGGCGGG GCGGATGGGG CGCTCCACCA GCGAAGTGGG CGACCTCGTG GCGGAGTACA TCGCCGGGGC ATGA
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Protein sequence | MAQGKAYRIA VIPGDGTGPE VVREGLKALD AVAAVKGFKV EKVHYDLGGE RYLKTGDILP QGVLDELRTF DAILLGAIGH PDVKPGILEK GLLLELRFQL DQYINLRPVI LYPGVETPLK DKRPEDIDFV VVRENTEGLY AGSGGFLRKG TPHEVAIQES INTRVGVERC IRFAFDFCRR RNAGKKLTLC GKTNVLTYAF DLWQRVFNEV AGEYPDIGTD YAHVDATCMW MVKNPEWFDV IVTDNMFGDI ITDLGAMIQG GMGIAAGGNI NPSGVSMFEP IGGSAPKYTG QNVINPLAAV AAVQMMLDHL EERPAAALIE KAIKKVVARD IKSLSAGRMG RSTSEVGDLV AEYIAGA
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