Gene Sfum_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3022 
Symbol 
ID4458642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3726173 
End bp3726691 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content60% 
IMG OID639703794 
Productacetolactate synthase, small subunit 
Protein accessionYP_847131 
Protein GI116750444 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0809645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.107141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACA CCCTTTCGGT TCTCGTGGAA AACAGTCCCG GTGTCCTGAC CCGGGTCGCC 
GGCTTGTTTG CCCGGCGGGG ATTCAACATC GACAGCCTGG CGGTCGGCCG TACCGAGCGA
AACGATGTGT CCAGGATGAC CATCGTGGTC GAGGGCGATC ACCATTACAT CGAGCAGGTC
ACCAAGCAGC TCCATAAGCT GATCGACGTC ATCAAGATCA GCGACATCAC CACCGATGAA
TACGTCGATC GGGAACTGGT GATGGTCAAG GTGGCGGCCG AGCCCAGCCA GCGGGTGGAA
ATCATGCACA TCGCCGGTAT CTTCCGGGCG CGGGTGGTCG ATCTGGCCCG CAAGACCATA
ACGTTCGAGT GTACCGGGAC CGAGGGGAAG ATCAATGCCT TCGAGGAGTC CTTGCGCCCG
TACGGGATCA AGGAACTGGT TCGGACCGGG AAGGTTGCCA TGTTGCGCGG CGCAAGGTTC
GTCAGCGTGG ACGGCGGATC GAAGGAGATA GAGTCTTAG
 
Protein sequence
MKHTLSVLVE NSPGVLTRVA GLFARRGFNI DSLAVGRTER NDVSRMTIVV EGDHHYIEQV 
TKQLHKLIDV IKISDITTDE YVDRELVMVK VAAEPSQRVE IMHIAGIFRA RVVDLARKTI
TFECTGTEGK INAFEESLRP YGIKELVRTG KVAMLRGARF VSVDGGSKEI ES