Gene Sfum_3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3011 
Symbol 
ID4458666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3714786 
End bp3715763 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content60% 
IMG OID639703783 
Productpeptidase M28 
Protein accessionYP_847120 
Protein GI116750433 
COG category[R] General function prediction only 
COG ID[COG2234] Predicted aminopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.844179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.067434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCC TGTGGAGGAT TATCGTGTTG ACCGCGGTCT CGGTGCTCGT CTCAGTGGCG 
ATATTGTGGT TTGTGCTCAC CCAGCCGACC TGGCGCACGT CGGCTGAAAA CCTCCCGGCA
TCCATTGATC CCGCACGCCT CGAACGGCAC ACGCGGATGC TTTCGGAAAC TTTTGTGCCG
CGGGATGCGG GCCATCCCGA AAACCTGGAC CGGGCGGCGG CCTACGTTCG GGACGAATTC
GATAAAGCGG GAGGCCGGGT CGTCGAACAG CCGTTTCAAG TCGATGGATC GACGTATCGC
AACGTAATCG CCTGCTTCGG ACCGGAAACG CAGGACAGAA TCGTTGTCGG CGCACATTAC
GACGCTTTTG AGGAATGGCC GGGCGCCGAC GACAACGCCG GCGCCGTGGC GGGACTGATC
GAACTGGCAC ATCTGCTCCG TAAGAGCTCC TTGAACACCC TCGTTGAACT CGTCGCCTAC
AGCCTGGAGG AACCTCCCTA TTACGGAACG CCGCATATGG GCAGCGCCGT CCATGCGTCT
TCACTGAAGG CGCGGAACCG ATCGGTTCGC ATCATGATCT GCCTTGAGGC GATCGGTTTC
TTCAACGACC GGCAAGGGAG TCAGAAATTT CCATTCATCC TGCTCAAAGC TTTCTACCCG
AGCCGGGGAG ATTTCATCGC CGTCGTGGGC AAAATGGACC AAACCGACGT GGTGCGCCGG
GTCAAGAGAG CCATGCGGGG CGTCTCCCCT CTGCCCGTTC ATTCCATAAA CGCCCCGGCG
ATCGTCCCCG GGATCGATTT CTCCGACCAT CGCAATTACT GGCGCGAGGG CTGGAAAGCG
GTCATGATCA CCGATACGGC CTTCTACCGC AACGCAAGCT ACCACACTGC CGGCGACACG
GCCGACACCC TCGACTACAA ACGCATGGCC ATGGTCGTGC AGGGAGTCCA TCAGGCCGTG
CTGCATTTCA GCCGTTAG
 
Protein sequence
MRFLWRIIVL TAVSVLVSVA ILWFVLTQPT WRTSAENLPA SIDPARLERH TRMLSETFVP 
RDAGHPENLD RAAAYVRDEF DKAGGRVVEQ PFQVDGSTYR NVIACFGPET QDRIVVGAHY
DAFEEWPGAD DNAGAVAGLI ELAHLLRKSS LNTLVELVAY SLEEPPYYGT PHMGSAVHAS
SLKARNRSVR IMICLEAIGF FNDRQGSQKF PFILLKAFYP SRGDFIAVVG KMDQTDVVRR
VKRAMRGVSP LPVHSINAPA IVPGIDFSDH RNYWREGWKA VMITDTAFYR NASYHTAGDT
ADTLDYKRMA MVVQGVHQAV LHFSR