| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3007 |
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| Symbol | |
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| ID | 4458662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3708266 |
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| End bp | 3710635 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639703779 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_847116 |
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| Protein GI | 116750429 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.165879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATGG GAGTGAGAGC CTTCTTGTTC GTCCTGGTCC TTCTTGTCTC CGTGCCGGGG
TCCGCCCCGG CCCAGGAAAC CGTTTCGCGC GCGCCGGGCA TCGTTGACAT CGGGGAACCG
CTGTCCTTCA TCGAGTTCGA GCAGGCCTAC GGCGACAACA AAGAACTACC GAGGACCGAC
GAGGATGTCC TGGCGCTCGC CCGGCGCCTG TTCCACGATC CCGAACAGGA GGCGCTTCTC
GAGGTGCGGC AGCAGGGGTT GGAGCTCTGC GGCTCCTACG ACCTGCAACT GCTGCTCACC
GCCCTGAAAA ACCCCGCCAT ATCGGAAGCC GCCCGCGAAA CCGTCCGGCG GATCATCGAA
CGGGAAGACG CAGTCCCTTA CAAGCAGGCG ACCAGGAAGC ACTTCAGGTT CTACTACCGG
GACAACCATC CCGACCCGAA ATATAACGTG ACGTTGCGGG ATGTTGAAGC CGCCGCCGAG
ATCCTGAACC GTCTCTGGTA CAGGTATTCC CGAGATTTCA GGACTCCGCT GAACTACATC
TCGACAATCG ATCCGGTCGG CCGCCGGATG ATCGATATCC TCATAAGGCC TCTCCCCGGT
TCGGTGGGAG GCATGACCAG CCCCGACAGC CCGGTGATCC AGCTCGCTCC CTGGGGGATG
AAAGACGAAT GTTTCCGGAA GGAAATCTGC GCTCATGAAT TATTCCACCG CGTACAGTTC
TCTTACGGAT GGCACGGGGA ATCATCCACC AGGTGGCTGC TGGAAGGGTC GGCCACCTGG
TCCCAGAAAT ACGCCTATCC TCAGGAGCAT GCTTACATGC GCTGGATGAA CAGGGGACTG
TCCACACCAA ACGTCGACCT GACGACTCGC GCCTATGACG CCTGCCACCT GTGGGTTTAC
CTGGCGGAGC GGGCCGGGTG GAGTGCAATC CGGCAGTTGT GGGCCAATTA CAAGGAACAC
GGTCCCATGG AGTCGCTCGA CCTGGTGACC GCCAGGAGGC TGGGCCTGAA CTTCGAAGAA
TTTCTGACCC AGTGGATGAA GGCCAATTAT GTCAAGGACA CCGCGAACGC TCCCCCCAGG
TACGAGTACG AAGAGGACGA TGAGCCGGGC CTCAATTGCG GGCGCGAGTA CGGCCCCTTG
AGGCATGTCG ACAAGAACTG GATGAAACCG GTAACCAGGT TCACGATCAC CGTCAATGCC
GGCGGAACGC TGCAAGCCTT CGGCGCCCAC TACTATGTTT TCCCGCTGGA CCCCTCCGTT
ACGGAATTCA CCTTCAAGCT CAAAGGATCG GAGAGCGGCG TTTTTCGCTA CTATGTGCTG
GGCACGAAAG ACAACCTGGG CGTGGCCGCG TATAACGGGG AGGGCTCGAG CTTCAGCATC
CATAAGAAGC TTGCCGAGAA CGAATGGGAC CAAGTGGCGG TCGTCGTGAT GGCCTTGATG
TTCGGCGGCG ACTACACCCT CGTTTATAAC GGGGACCTGC CGGTCGCGTT TCCCGACCCC
GTGCTCAGGT CCATCGTCAG GAAAGCGATC GGAAAACCCA CGGGGCCCAT TCTGAAGAGC
GACCTGATCC GGTTGGAGTC GATCGACGAC TGGGGCTACG ACGGCAAGAT CAGCAATCTC
TCGGGTCTCG AGTATTGCGG CAACCTTCAA TCGCTGCAGC TCCCGAATCA TCTCATAGCG
GACGTCGCAC CCCTGGCCCG CCTCAGGAAA ATCACTCAAC TCAACCTGAC CCGCAATCAA
GTGGCGAACC TGCGGCCGCT TCGGTTCCTG GATGAGTTGA AGAGCCTCGA GCTATACGAC
AACCAATTAA TTGACATCTG GCCTATCCAG TGGTGCAAGA AGCTGATTGT ACTCGACCTG
GGCCGCAACC GGATTCAGTC GGTGGAAACG CTCGAAAATC TGATCGATCT CACCTATCTC
AGCCTCGACC AGAACCGAAT CGGTAACATC AGCCCCCTCT CCGGCCTGGC GAAGCTGAAG
GAACTGAATT TGAGCGGCAA CCTCATCCAA AGCCTGGAAC CGCTTTTCAT GTTGACCGGC
CTGCTCAACC TTCACGCCTC CGACAACCGG GTCTCGACGG CCGCAGGACT GCAATCCCTG
TCCAACCTCG TGGTGTTGAG TCTCGCCCGC AACCCGGTCG CGGATATATC CGATCTTGCG
TTCCTCCACG ACATCGGAAG CGTGAACCTC GATTCCACCG AGGTCGAGGA CATCCAGCCG
CTGGTGGACA ATCCCGGGTT GGGCATGAAC GATTACGTCT GGCTGCGCGA TACCGGTCTG
AGCCACAACT GCGACCCGGC GAAAGGAGAC GTCAAGGACT GCAAGGACGT TGAAACCCTG
AAAAACCGCG GGGTTTATGT GGGCTGGTGA
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| Protein sequence | MAMGVRAFLF VLVLLVSVPG SAPAQETVSR APGIVDIGEP LSFIEFEQAY GDNKELPRTD
EDVLALARRL FHDPEQEALL EVRQQGLELC GSYDLQLLLT ALKNPAISEA ARETVRRIIE
REDAVPYKQA TRKHFRFYYR DNHPDPKYNV TLRDVEAAAE ILNRLWYRYS RDFRTPLNYI
STIDPVGRRM IDILIRPLPG SVGGMTSPDS PVIQLAPWGM KDECFRKEIC AHELFHRVQF
SYGWHGESST RWLLEGSATW SQKYAYPQEH AYMRWMNRGL STPNVDLTTR AYDACHLWVY
LAERAGWSAI RQLWANYKEH GPMESLDLVT ARRLGLNFEE FLTQWMKANY VKDTANAPPR
YEYEEDDEPG LNCGREYGPL RHVDKNWMKP VTRFTITVNA GGTLQAFGAH YYVFPLDPSV
TEFTFKLKGS ESGVFRYYVL GTKDNLGVAA YNGEGSSFSI HKKLAENEWD QVAVVVMALM
FGGDYTLVYN GDLPVAFPDP VLRSIVRKAI GKPTGPILKS DLIRLESIDD WGYDGKISNL
SGLEYCGNLQ SLQLPNHLIA DVAPLARLRK ITQLNLTRNQ VANLRPLRFL DELKSLELYD
NQLIDIWPIQ WCKKLIVLDL GRNRIQSVET LENLIDLTYL SLDQNRIGNI SPLSGLAKLK
ELNLSGNLIQ SLEPLFMLTG LLNLHASDNR VSTAAGLQSL SNLVVLSLAR NPVADISDLA
FLHDIGSVNL DSTEVEDIQP LVDNPGLGMN DYVWLRDTGL SHNCDPAKGD VKDCKDVETL
KNRGVYVGW
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