| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2999 |
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| Symbol | |
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| ID | 4458689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3702596 |
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| End bp | 3703126 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639703771 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_847108 |
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| Protein GI | 116750421 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000783686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.831438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTAAGA CGGTGGAACC AGCCTGCCTC GTTCCGGTGG GTAAGGTCAC ACGCACTCAC
GGGATTCGCG GGGCTTTGAA AATTTTTCCC TATGGAGAAA GCCTCGCCGC GCAGGCGGCC
GGGGAGAGGT TTTTTCTGCG CTCGAAAAAT GGGGGTTACT GCACCCTCAC ATTGATCGGC
CTCCGGGCGC AGGGCAGAAT GCTGGTGTGC GGATTTGAAG AAATCAAGGA CGTCAATGGG
GCACAGCCGT TCGTAGGAGA AGAGATCTTC CTGCCTGAAG ACCGACTCCC GCCCGTTTCC
GAAGGAGAGT ATTACCACTA CCGGCTCATC GGACTCGATA TCGTGACCCT GGACGGCGAA
TCGCTGGGCG TTCTGCGCAA GATCATCGAA ACCGGCGGCA ACGATGTCTA CGTGGCGGAG
CGTGAGGGGC GGGAAATACT CATTCCGGCC ATTGAGGACG TGATCCGGGA AATCGACCTG
GAGCGGAAAC GAATGGTGGT CGATCTGCCG GAAGGGTTGG TTGACGCATG A
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| Protein sequence | MSKTVEPACL VPVGKVTRTH GIRGALKIFP YGESLAAQAA GERFFLRSKN GGYCTLTLIG
LRAQGRMLVC GFEEIKDVNG AQPFVGEEIF LPEDRLPPVS EGEYYHYRLI GLDIVTLDGE
SLGVLRKIIE TGGNDVYVAE REGREILIPA IEDVIREIDL ERKRMVVDLP EGLVDA
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