| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2989 |
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| Symbol | |
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| ID | 4458679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3691310 |
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| End bp | 3692383 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639703761 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_847098 |
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| Protein GI | 116750411 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.128527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.6315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAAG GAAAAGCATA TCGCATTGCG GTGATTCCCG GAGACGGCAC AGGGCCGGAA
GTGGTCCGGG AAGGGCTCAA GGCGCTCGAC GCGGTCGCCG CCGTGAAGGG CTTCAAGGTG
GAGAAGGTGC ATTACGACCT GGGCGGCGAG AGGTACCTGA AGACCGGGGA TATCCTCCCG
CAGGGAGTTC TCGATGAATT GCGGACTTTC GACGCCATTC TGCTCGGCGC GATAGGACAT
CCCGACGTCA AGCCGGGAAT CCTGGAAAAA GGGCTTCTGC TGGAGCTGCG GTTCCAACTG
GACCAGTACA TCAACCTGCG TCCGGTCATC CTGTATCCCG GGGTGGAGAC TCCCCTCAAG
GACAAGAGGC CCGAGGACAT CGACTTCGTC GTTGTGCGCG AGAACACCGA AGGGCTGTAC
GCCGGTTCGG GCGGTTTTCT ACGCAAGGGG ACGCCTCACG AGGTGGCGAT CCAGGAATCG
ATCAACACGC GCGTGGGCGT CGAGCGTTGC ATCCGCTTCG CGTTTGACTT CTGCCGCCGG
AGGAACGCCG GGAAAAAGTT GACCTTGTGC GGCAAGACGA ACGTCCTGAC CTATGCCTTC
GACCTCTGGC AGCGCGTGTT CAACGAAGTG GCGGGGGAAT ACCCGGATAT CGGGACCGAC
TACGCCCATG TGGATGCGAC GTGCATGTGG ATGGTGAAAA ACCCCGAGTG GTTTGACGTC
ATCGTGACGG ACAACATGTT CGGGGACATC ATCACCGACC TCGGGGCCAT GATCCAGGGC
GGGATGGGAA TTGCCGCGGG CGGCAACATC AATCCTTCGG GCGTGTCCAT GTTCGAGCCC
ATCGGCGGGT CCGCGCCCAA ATACACCGGG CAAAACGTCA TCAATCCCCT GGCGGCCGTC
GCCGCGGTGC AAATGATGTT GGACCATCTG GAAGAGCGCC CTGCCGCGGC GCTGATCGAG
AAGGCCATCA AGAAGGTGGT GGCGCGGGAC ATCAAGAGCC TGTCGGCGGG GCGGATGGGG
CGCTCCACCA GCGAAGTGGG CGACCTCGTG GCGGAGTACA TCGCCGGGGC ATGA
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| Protein sequence | MAQGKAYRIA VIPGDGTGPE VVREGLKALD AVAAVKGFKV EKVHYDLGGE RYLKTGDILP
QGVLDELRTF DAILLGAIGH PDVKPGILEK GLLLELRFQL DQYINLRPVI LYPGVETPLK
DKRPEDIDFV VVRENTEGLY AGSGGFLRKG TPHEVAIQES INTRVGVERC IRFAFDFCRR
RNAGKKLTLC GKTNVLTYAF DLWQRVFNEV AGEYPDIGTD YAHVDATCMW MVKNPEWFDV
IVTDNMFGDI ITDLGAMIQG GMGIAAGGNI NPSGVSMFEP IGGSAPKYTG QNVINPLAAV
AAVQMMLDHL EERPAAALIE KAIKKVVARD IKSLSAGRMG RSTSEVGDLV AEYIAGA
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