| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2986 |
|---|
| Symbol | |
|---|
| ID | 4458676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3688302 |
|---|
| End bp | 3689165 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639703758 |
|---|
| Product | CDP-diacylglycerol--serine O-phosphatidyltransferase |
|---|
| Protein accession | YP_847095 |
|---|
| Protein GI | 116750408 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1183] Phosphatidylserine synthase |
|---|
| TIGRFAM ID | [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00345008 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCTG AAATAAAGAG GCGGCGCCCG AGGAAGCGCA AGTGGCGCCG ATTCAGGGAA
GGTGAAGTGG CCAGGGGCAC TTATATCGTG CCGAATCTCT TCACCACGGC CAACCTGTTC
AGCGGCTTTT TCGGCATCGT GAGCGCCATC GACGCACACT TCGACAGGGC CGCCATAGCG
ATTCTGGTTT CGTGCGTGTT CGACATCCTG GACGGAAAGG TGGCCCGGTT CACGCGGGCA
ACCAGCCGTT TCGGCGTCGA ATACGATTCT CTTGCGGATC TGGTGGCCTT CGGCGTGACC
CCGGCCCTGT TGATGTACCT GTGGGCCCTT CGGCCTTTCG GACGACTCGG CTGGCTGGCC
GCCTTTGTTT TCGTGGCCTG CGGAGCCCTG CGGCTGGCCA GATTCAACGT GCAGACGGAA
ACCGCGAGCA AGAAATACTT CGTGGGTTTG CCGATTCCCG GTGCGGCGAG CGTCGTGGCG
ACCACCCTGC TGTTCATCGA GGTGCTGGAG ATCACGCTGC CGCCGTCCGG AGGGGTCCTC
CTGCTCGTGG CCACGTACAT CCTCGGTTTC CTGATGGTCA GCACGGTCCC CTACAACAGC
TTCAAAGATT TTGAAATCGT CAAGGCCAAA CCCATCACGG TTCTGTTCGT GGCTGTTCTC
GGGCTGACGA TCGTGGCCGT CAACCCCGGC CTGATGCTCT TCCTGATGCT TATGGTCTAC
CTCGTATCGG GACCGGTCCG CTATGTCATA TGGCGTCTCA AGGGAAAACC CGGTACGCCG
GTGGTCGAGC CGCCCAAGTC GGTGGAGGCC GCGGAGGAGG GCCCCGGGCA ACCGGCGCCC
GCCGAAGAAC AGTCTCAAAC CTGA
|
|---|
| Protein sequence | MSPEIKRRRP RKRKWRRFRE GEVARGTYIV PNLFTTANLF SGFFGIVSAI DAHFDRAAIA
ILVSCVFDIL DGKVARFTRA TSRFGVEYDS LADLVAFGVT PALLMYLWAL RPFGRLGWLA
AFVFVACGAL RLARFNVQTE TASKKYFVGL PIPGAASVVA TTLLFIEVLE ITLPPSGGVL
LLVATYILGF LMVSTVPYNS FKDFEIVKAK PITVLFVAVL GLTIVAVNPG LMLFLMLMVY
LVSGPVRYVI WRLKGKPGTP VVEPPKSVEA AEEGPGQPAP AEEQSQT
|
|---|
| |