Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2980 |
Symbol | |
ID | 4458705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3681421 |
End bp | 3681939 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639703752 |
Product | acetolactate synthase, small subunit |
Protein accession | YP_847089 |
Protein GI | 116750402 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0440] Acetolactate synthase, small (regulatory) subunit |
TIGRFAM ID | [TIGR00119] acetolactate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0119022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACA CCCTTTCGGT TCTCGTGGAA AACAGTCCCG GTGTCCTGAC CCGGGTCGCC GGCTTGTTTG CCCGGCGGGG ATTCAACATC GACAGCCTGG CGGTCGGCCG TACCGAGCGA AACGATGTGT CCAGGATGAC CATCGTGGTC GAGGGCGATC ACCATTACAT CGAGCAGGTC ACCAAGCAGC TCCATAAGCT GATCGACGTC ATCAAGATCA GCGACATCAC CACCGATGAA TACGTCGATC GGGAACTGGT GATGGTCAAG GTGGCGGCCG AGCCCAGCCA GCGGGTGGAA ATCATGCACA TCGCCGGTAT CTTCCGGGCG CGGGTGGTCG ATCTGGCCCG CAAGACCATA ACGTTCGAGT GTACCGGGAC CGAGGGGAAG ATCAATGCCT TCGAGGAGTC CTTGCGCCCG TACGGGATCA AGGAACTGGT TCGGACCGGG AAGGTTGCCA TGTTGCGCGG CGCAAGGTTC GTCAGCGTGG ACGGCGGATC GAAGGAGATA GAGTCTTAG
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Protein sequence | MKHTLSVLVE NSPGVLTRVA GLFARRGFNI DSLAVGRTER NDVSRMTIVV EGDHHYIEQV TKQLHKLIDV IKISDITTDE YVDRELVMVK VAAEPSQRVE IMHIAGIFRA RVVDLARKTI TFECTGTEGK INAFEESLRP YGIKELVRTG KVAMLRGARF VSVDGGSKEI ES
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