| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2963 |
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| Symbol | |
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| ID | 4458723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3661262 |
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| End bp | 3665191 |
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| Gene Length | 3930 bp |
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| Protein Length | 1309 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639703735 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_847072 |
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| Protein GI | 116750385 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCGT CCTGTCGCAC GAAAAAGCCC GTTCGAGAAT TGCATTCCGG CCGTGATGAG
CCCTTTTCTC CGATCCGGTA TCCCTCCGAT CTCCCGATTG TCGAGCACAG GGGGGAGATC
CTGGGGGCGA TCGCCGAGAA CCAGGTAGTG GTCATCACGG GGGAGACCGG GTCGGGCAAG
AGCACCCAGA TACCGAAGAT GTGCCTGGAA GCGGGACGCG GCGCTCGGGG CATGATCGGC
TGCACGCAGC CGCGCCGCAT TGCGGCCGTT ACGCTTGCGG ACAGGGTATC CGAAGAGCTG
GCGGAAACGG GACCCCGGCG GGTGGGGTAC AAGATCCGTT TTCACGACCG AACAACGCGC
TCCACGCGGA TAAAGTTCAT GACGGACGGA ATTCTCCTGG CGGAAGCCCA GTCCGACCGT
CATTTTCGCG CCTACGACAC ACTCGTCATC GATGAGGCCC ACGAACGAAC GCTCAACATC
GATTTTCTCC TCGGACTCAT CAAAAGAATC CTGCCCCGGA GACCGGAGCT CAAGGTCATC
ATCACTTCAG CCACCATCGA TCCGGGGAAA TTCTCGAAGG CTTTCCAGGA TGCTCCGATC
ATCGAGGTTT CGGGCCGCAC CTATCCCGTC GATGTCCGGT ACCGGCCTCC TGCGAACGGA
GAGGGCCCGG AAGCGGACGC CGAGGACATC ACCCATATCG ACCAGGCCGT CGCCGCAACC
GATGAGTTGA AAGGCAGCGG GCAGGAAGGG CGTCGGGGGG ACATTCTCGT GTTCATGCCG
ACCGAGAGCG ACATTCGGGA AACCGTCCAG CGCCTCGATG AAAAACGCTA TTTCAACACG
GTGGTGATAC CGCTTTTCGG GCGCATGGCC GCCGCGGATC AGAAGAGAGT CTTTCTGCCG
ACGACCGAAG ACAAGATCAT CGTGGCGACG AACGTGGCGG AGACCTCCAT CACAATCCCC
CGGATCAAAT ACGTGATCGA CACCGGGCTG GCCCGCGTCT CCCAGTACAA CACCCGATCC
CGGACGCAGA GCCTTCCGGT GGCTCGGGTA TCCCGCGCGA GCGCGGACCA GCGCAAAGGG
CGTTGCGGTC GTGTGGAGGC GGGGATATGC ATCCGTCTCT ACTCCGTTGA GGATTATCTT
GCCCGGCCTC TCTACACGGC GCCGGAAATC CTGAGGTCGA ACCTGGCCGA GGTCATCCTG
AGGATGCTGT TTCTGCGGCT GGGCAGCATC CAGGAGTTTC CTTTCCTCGA TCCGCCTTCA
CCGTCCGCCG TCAAGGACGG ATTCGCCGTG CTCAGGGAAT TGGGGGCGGT GGATGAGCAC
CGCAGGTTGA CGGCCATGGG AAGAGTCATG GCACGCCTGC CCCTGGACCC GAGACTTTCC
CGGATGCTGC TTCAGGCCCG TGAGGAAGGG GCGGTGACGG AACTGACCAT CCTCGCGGCG
GCACTGAGTG TCCAGGACCC GCGGGAAAGG CCCCTGGACA AGGAAACCCA GGCGGACCAG
GCGCACGCCG TCTTCCGGGA TACACGGTCC GATTTCGTGA CGTTGCTCAA GATATGGGAA
AAATGCTGGC CGAGGTGTGA AGCCGCGATC GCATCGTCCG AAGCCCGGCC GCAGGACCCT
GATCGGGGCG CCGCCGCGAA CGGTCCCACC CGGCATGATG TCGCCCTGGG CACCCGCGGG
GAGAATCGGC TCGTCCGATA TGCATCCCGC AGCCAGAGCC AATTGCGTAA GTTCTGTCGG
GAACATTTTC TCTCGTATCG AAGAATGCGG GAATGGCGCG ATGTGTGGGA GGAAATCCGG
GAAATCCTCG AAGAAATGGG CGGTTTTCCG GAGAATTCCG ATCCCGCCGG CTACGAAGCC
ATTCACCGAT CCGTGGTGAG CGGGTACCTG AGCCACATCG CCATGCGCAA GGAAAAGAAT
ATCTACACCG GAACAAAGAA TCGCCAGGTG ATGCTCTTTC CCGGCTCGGG TCTTTTCAAT
CGCGGGGGCG CCTGGGTGAC GGCGGCGGAA GTGGTACAGA CCACGAGACT CTTTGCGCGC
ATGGCGGCCA ATGTCGATCC GGAGTGGCTC GAACGGCTGG GCGGGCACCT GTGCCGCTCC
ACCGTATTCG AGCCCCACTG GGAGAGGAAG CGCGGCCAGG TGACGGCCTT CGAGCGCGTG
ACGCTGTACG GCCTGCCCGT GGTGGACCGG CGGAAGGTGA ACTTCGGCGC GGTCCGACCC
GCGGAAGCCC GGGATATTTT CATTCGTAGC GCTCTGATCG AGTACGACGT GCCGAAACCC
TACGGTTTTC TCGATCACAA CCGGGACCTG GTCCGGCAGA TCGAGGAGAT CGAGAGCAAG
ACCCGCAGGC GGGACCTGCT GGTGGACGAA GAAACCGTTT TCCGCTTCTA TGACCGGCGA
TTGCCGGCAA TATGCGAGCT GCGCTCACTG GACAAGTGGA TCAAGGATCA CGGCGGGGAC
CATTTTCTGC GCATGACCGA ATCGGACATC CTTCGGACCG AGCCGGATTT CGGAGAACTG
GAATTGTTCC CGGACCGGTT GAAACTCGAG GACGTCGAGC TTCCTCTTCG CTACGCGTTT
CGACCCGGAG AGGAAGACGA CGGCATAACG GCGACCGTTC CGGTTCACGT GCTCCCGCGG
CTGGCCCCGC AGTCGTTCGA GTGGCTCGTC CCGGGGATGC TCGCGGAGAA GCTGGCGATT
CTGCTCAAGG GGCTTCCCAA GAGTCAGCGC AGGCAACTCG TTCCGGTTGG CGAGACGGCG
GCCAGGCTGA TCGAAATGCT GCGCCGGCGG AGCGGCGATT TCCACGAGCA GTTGAGTCTG
TGCGTGCGCG AGTTGGCGGG AGTCTCGGTG CCCGTCGACC AGTGGCGACG CATCGACCTG
CCCCCGCATC TGCGGATGCG CCTGGAAATC ACGGGCCCGG AAGGGAATCT GCTGGGAGTC
GGACGCGACT TGCTCGAGCT GAAGAGCCTG GCGGTGGAGA AGCACGAAGA CCGGCTCTGG
GAACAGGCAC GGGCCGCATG GGAACGGGAA GGGCTGACCT CCTGGAGCTT CGGCGAATTG
CCGGAGCGGG TCCCAATCGG CAAGGATGCT CTCGGCCTGA CGCGGTACGC ATACCCGGGG
CTTGTCGCCG AAGGGCAAAC GGCAGCCGTT CGGCTGTACG CCGAACCGGA AGAAGCCACC
CGGGCGAGCG CCGGGGGCCT TCGCCTCCTG TTTGAGCTGA CCTTCGGAGA TGAATTGAAG
TATTTCAGGC GAGACTGGAC GTTTTCGAAG AAGACGGCCT CGATGCTTTT CTTCATGGGC
GGTCGGGAGG AAGCGGTTCG ATGCCTTCAT GACTATATTT TGAGGGAACT CTTCGAGCTC
GATGCACCCG GGCTTCCAAG CTACGGACGA TTCTACGACG TCGTTCGACG TTTGACGGGC
AGGCTCGGGG CCGCCGCCAG GGCCCTGCTC GACGAGGTGG AGGCGGTGAT CGGCGAAAGG
GAGTCGACCC GCTCCGAGAT CGAGCGTTAC AAACGCATGG CCGAAGCGAA CCCGGCAGCC
GTGCGGTGCC TCCTCGGACT GAGCCGCGAG CTGGTGACCC TGGTGCCGGG GAATTTCCTG
GTTCAATCCG GGAGCGACCG CATGCGGGAA TTGCCCCGTT ATTTGAAGGC CTTGAGGTTG
AGAGCCGAGC GGGCTTACGC CGCTCCCGAA AAAGACCGCC TGAAAGCGGG GCAGATTGCC
CCGTACGAAA AGCATCTCGA GGAAATGCGG ACCCGGATTT CAGAGCATTC CGAAGAATCG
CCGCGGAGGC TGTACGAAGA ATACCGGACG ATGCTCGAGG AGTTCAAGAT CAGCCTGTTT
GCGCCCGAAA TCAAGACCCG ATTTCGGATA TCCGCCAAGC GCCTCGATGA GAAACTGGAG
GAATGGAAGC CGTGGAAGGC CGTGGATTGA
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| Protein sequence | MNSSCRTKKP VRELHSGRDE PFSPIRYPSD LPIVEHRGEI LGAIAENQVV VITGETGSGK
STQIPKMCLE AGRGARGMIG CTQPRRIAAV TLADRVSEEL AETGPRRVGY KIRFHDRTTR
STRIKFMTDG ILLAEAQSDR HFRAYDTLVI DEAHERTLNI DFLLGLIKRI LPRRPELKVI
ITSATIDPGK FSKAFQDAPI IEVSGRTYPV DVRYRPPANG EGPEADAEDI THIDQAVAAT
DELKGSGQEG RRGDILVFMP TESDIRETVQ RLDEKRYFNT VVIPLFGRMA AADQKRVFLP
TTEDKIIVAT NVAETSITIP RIKYVIDTGL ARVSQYNTRS RTQSLPVARV SRASADQRKG
RCGRVEAGIC IRLYSVEDYL ARPLYTAPEI LRSNLAEVIL RMLFLRLGSI QEFPFLDPPS
PSAVKDGFAV LRELGAVDEH RRLTAMGRVM ARLPLDPRLS RMLLQAREEG AVTELTILAA
ALSVQDPRER PLDKETQADQ AHAVFRDTRS DFVTLLKIWE KCWPRCEAAI ASSEARPQDP
DRGAAANGPT RHDVALGTRG ENRLVRYASR SQSQLRKFCR EHFLSYRRMR EWRDVWEEIR
EILEEMGGFP ENSDPAGYEA IHRSVVSGYL SHIAMRKEKN IYTGTKNRQV MLFPGSGLFN
RGGAWVTAAE VVQTTRLFAR MAANVDPEWL ERLGGHLCRS TVFEPHWERK RGQVTAFERV
TLYGLPVVDR RKVNFGAVRP AEARDIFIRS ALIEYDVPKP YGFLDHNRDL VRQIEEIESK
TRRRDLLVDE ETVFRFYDRR LPAICELRSL DKWIKDHGGD HFLRMTESDI LRTEPDFGEL
ELFPDRLKLE DVELPLRYAF RPGEEDDGIT ATVPVHVLPR LAPQSFEWLV PGMLAEKLAI
LLKGLPKSQR RQLVPVGETA ARLIEMLRRR SGDFHEQLSL CVRELAGVSV PVDQWRRIDL
PPHLRMRLEI TGPEGNLLGV GRDLLELKSL AVEKHEDRLW EQARAAWERE GLTSWSFGEL
PERVPIGKDA LGLTRYAYPG LVAEGQTAAV RLYAEPEEAT RASAGGLRLL FELTFGDELK
YFRRDWTFSK KTASMLFFMG GREEAVRCLH DYILRELFEL DAPGLPSYGR FYDVVRRLTG
RLGAAARALL DEVEAVIGER ESTRSEIERY KRMAEANPAA VRCLLGLSRE LVTLVPGNFL
VQSGSDRMRE LPRYLKALRL RAERAYAAPE KDRLKAGQIA PYEKHLEEMR TRISEHSEES
PRRLYEEYRT MLEEFKISLF APEIKTRFRI SAKRLDEKLE EWKPWKAVD
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