| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2953 |
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| Symbol | |
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| ID | 4458713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3644540 |
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| End bp | 3645478 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639703725 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_847062 |
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| Protein GI | 116750375 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.617485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCACC AAGAAGGCTT CGAGGAACGG TTGGAAGAAA AAGGAGTTTC ACGACGAGAT
TTCATGAAAT TCTGCACATT CCTGTCGGTA ACGATGGGGC TTTCTTCGTC GTTCGTACCC
AAGATCGCTG AAGCGCTTGC TTCGCCTCAA CGGCCGCCGG TCGTCTGGCT CGCTTTCGCG
GAGTGTACCG GCTGCGCCGA GTCTCTGCTC AGAACAACCT ATCCCTGGAT CGACACCCTG
GTCCTGGACA TCATCTCCCT GGACTACCAT GAAACCATCA TGGCCCCGTC GGGTGAAGCA
GCCGAGAAGT CGCTGCATGA CACGGTCGCC AAGTATCCCG GAAAGTTCAT CTGCGTGGTC
GACGGTGCCA TTCCCACGGC CGAGGACGGC AAGTACGGCA TGCTTGGGGG ACGCACTTTT
CTCGAAATCG CCAAAGAGGT CTGCCCCAAG GCTTTGGCCA CGATCTGCAT CGGGACTTGC
GCTTCCTACG GCGGCCTTCC CGCTGCCGCT CCCAATCCGA CGGGAGCCAA GTCCGTAAAG
GACGCCATCG GCATCAACAC CGTCAATATT CCCGGCTGTC CGCCGAATCC CATCAATTTC
ATCGGGACGG TCGTGAACTA TCTCCTGTTC GGTAAGCTTC CCGCCGTGGA TGACAAGGGA
AGACCGTTGT TCGCCTACGG TCAGACCATC CACGACCAGT GTCCGCGTCG AGGTCACTTC
GAGGCCGGTG AATTCGTGAC CTCCTTCGAA TCGCCTGAGG CCAAGATGGG TTACTGCCTC
TACCAGTTGG GCTGCAAGGG ACCCGAGACG TACAACAACT GCCCGCTCGT GAAGTTCAAC
ATGGGCACGA GCTGGCCGGT ACAGGCGGGA CATCCTTGCA TCGGGTGCAG CGAGCCCAAC
TTCTGGGACA AGATGTCGCC TTTCTACAAG TCGCTGTAG
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| Protein sequence | MKHQEGFEER LEEKGVSRRD FMKFCTFLSV TMGLSSSFVP KIAEALASPQ RPPVVWLAFA
ECTGCAESLL RTTYPWIDTL VLDIISLDYH ETIMAPSGEA AEKSLHDTVA KYPGKFICVV
DGAIPTAEDG KYGMLGGRTF LEIAKEVCPK ALATICIGTC ASYGGLPAAA PNPTGAKSVK
DAIGINTVNI PGCPPNPINF IGTVVNYLLF GKLPAVDDKG RPLFAYGQTI HDQCPRRGHF
EAGEFVTSFE SPEAKMGYCL YQLGCKGPET YNNCPLVKFN MGTSWPVQAG HPCIGCSEPN
FWDKMSPFYK SL
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