| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2952 |
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| Symbol | |
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| ID | 4458712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3642823 |
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| End bp | 3644463 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639703724 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_847061 |
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| Protein GI | 116750374 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.437472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGC GAGTAGTCAT CGACCCGATC ACCCGTATCG AGGGTCATCT GCGTATAGAA
GTGGAAGTGA CCAACGGCAA GGTGTCCAAC GCCTGGAGCA GCTCGACGCT CTTCCGCGGC
CTCGAGATCA TGCTCCAGGG ACGCGATCCC CGCGACGCCT ACCTGTTCAC CCAGAGAGCC
TGCGGCGTGT GCACTTACGT TCACGGCCTG GCATCGGTCC GCGCGGTGGA CGATGCGGCC
AAGATCACGG TGCCCGAGAA TGCACGACTG ATTCGTAACC TGCTCCTCGG CGCCCAGTTC
CTTCATGACC ACATTGTGCA CTTTTATCAC CTGCACGCCC TCGACTGGGT GGATGTGGTC
AGCGCGCTCA AGGCCGATCC CAAGAAGACG GCGGATTTGG CCGCAAAGGT CTCGCCCGCC
CCGGGCAGCG GCATCAGCGA CTTCAAGGAA ACTCAGGGCC GCGTGAAAAA ACTGGTCGAA
AGCGGTCAGT TGGGCATCTT CGCCAACGGT TACTGGGGGC ATCCGGCGTA CAAGCTGCCC
CCCGAGGTCA ACCTGCTGGC GGTCGCGCAT TACCTGCAAG CCTTGCGGCA GCAGGCCCGC
ACCGCTCGAA TGCACGCCAT CTTCGGCGGC AAGAACCCGC ATGTCCAGAG CCTCGTGGTC
GGCGGCGTCA CCTGCGCCAC CGATCTGACC CCGGATCGCC TCGCCGAATT CAAGTACCTT
TACAAAGAGA CCATGGATTT CGTCAAGCAG TACTACATCC CCGATCTGAA AGCCGTGGCG
GGCTTTTACA AAGACTGGGG CAAGATCGGC GGAACCAAGA ATTTCCTCGT CTACGGTGAA
TTCCCTCAGA GCGACAAGGA ACCCGACAGC TTCCTCTTCC CGCGGGGCGC CATTTTCAAG
CGCAACATCG GCCAGGTGCA GGCGGTCGAT ATGGCCCAGG TGCAGGAGCA CGTGAAGCGC
AGCTGGTACG AAGGCGACAA GGCGCTGCAT CCTTCCGAGG GTGAAACCAA GCCCAAGTAC
GAGGCCCTCG ACGTCGAAAA GCGGTACAGC TGGATGAAGG CCCCGCGCTA CAAGGGCGAA
CCCATGGAGG TCGGGCCGCT GGCGCGCGTG CTGGTGGCCT ACGGCAAGGG TCACGCCCCG
ACCAAGAAAG CCGTGGACGG CCTGTTGAAA GAGTTGGGCG TTCCCGTGGA CGCTCTCTTC
TCGACGCTCG GCAGGACTGC GGCCAGAGGT CTGGAAACGG CGATCATCGG CGATTCCATG
GAAGGCTGGC TGAACCAGTT GATCGAGAAC GTCGGCAAAG GCAATACCAA GATATACCAG
GATTACCAGA TGCCCGCCGA AGCCATGGGA GCGGGTCTGA ACGACGTTCC CCGCGGCGCG
CTCGGGCACT GGGTCCAGAT CAAGGACCAG AAGATCGCCA ACTTCCAGCT GGTCGTTCCG
TCCACCTGGA ACCTCGGTCC GCGTTGCGCG CAAAACAAGC CGGGACCGGT CGAGGAAGCC
CTGATGGGAA CCCCGGTGGC CGATCCGAAG CGTCCGGTGG AAATCCTGCG CACCGTTCAT
TCCTTTGACC CGTGCATCGC GTGCGGCGTC CATGTGATCG ATCCGAAGTC CAACGAGGTC
TACAAGTTCA GGGTTGTGTA G
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| Protein sequence | MGQRVVIDPI TRIEGHLRIE VEVTNGKVSN AWSSSTLFRG LEIMLQGRDP RDAYLFTQRA
CGVCTYVHGL ASVRAVDDAA KITVPENARL IRNLLLGAQF LHDHIVHFYH LHALDWVDVV
SALKADPKKT ADLAAKVSPA PGSGISDFKE TQGRVKKLVE SGQLGIFANG YWGHPAYKLP
PEVNLLAVAH YLQALRQQAR TARMHAIFGG KNPHVQSLVV GGVTCATDLT PDRLAEFKYL
YKETMDFVKQ YYIPDLKAVA GFYKDWGKIG GTKNFLVYGE FPQSDKEPDS FLFPRGAIFK
RNIGQVQAVD MAQVQEHVKR SWYEGDKALH PSEGETKPKY EALDVEKRYS WMKAPRYKGE
PMEVGPLARV LVAYGKGHAP TKKAVDGLLK ELGVPVDALF STLGRTAARG LETAIIGDSM
EGWLNQLIEN VGKGNTKIYQ DYQMPAEAMG AGLNDVPRGA LGHWVQIKDQ KIANFQLVVP
STWNLGPRCA QNKPGPVEEA LMGTPVADPK RPVEILRTVH SFDPCIACGV HVIDPKSNEV
YKFRVV
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