Gene Sfum_2950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2950 
Symbol 
ID4458710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3641792 
End bp3642034 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content60% 
IMG OID639703722 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_847059 
Protein GI116750372 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.556547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTGG CCATTCCAGC GGAAGTCTTG GAGATCGAGG ACGAAATGGC GACCGTGCGA 
GTGGGAGATG CGATTCGCAG GACTTCCCTG ATGCTGCTGC CGGAGAAACC GAAGCTGGGA
GATTACGTCA TCATTCACGC GGGGTTTGCT CTGCATACCG TCGATCCGCA GGAAGCCATG
GAATCCCTGC GCATCCTTCG CGAGATGGCT GCGCTGGCCG GTGACGATCC GCCCGAGGGG
TAG
 
Protein sequence
MCLAIPAEVL EIEDEMATVR VGDAIRRTSL MLLPEKPKLG DYVIIHAGFA LHTVDPQEAM 
ESLRILREMA ALAGDDPPEG