Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2943 |
Symbol | |
ID | 4458736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3631368 |
End bp | 3634313 |
Gene Length | 2946 bp |
Protein Length | 981 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639703714 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_847052 |
Protein GI | 116750365 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.677183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGT CTCGCAGCCT GCTGAGGATA TTTTTGTGGA ACGCCGTCAT TGCCGTTCTG GTTGCCCTCG TTGCCGCCGG GATGTTGACC AACCTCACCC TGCGCTCGGT GGAGAAAAAC CTGCCGAATA CACTGCTCGA ACAGCTGCAC GACGTGGCAC GCATCATCGA GGATCTTGCG GATGTCGTGT CCGCGGCTGA ATTGACCAGG GCCGTCCCGA GCTCAGAGAA TCTCAAGCGG CTCCGCGGGG AAGTCGACGC CGCAAACAAC GCCGTCGTAA GGCTCCGCAA CACATATGTT TTTGACAATC TCATTCAGGC ATCCGCCATT CACGCAGTCG TTGCCCCGGC GCTCGCCGAT GCCCGGGTCT GGCTTTCTGA AGGTGTCTCG GGATACGGCC CTGAATCGGA GACCACGATC GGCGTCGTCC TGCTGAGAAT CTCCAAGGCG TTTCATAAAG CCAGGGCTCT GAACCACGCT TCCGAAGAGA AAGCTCAAGC GATTCTGAAC GAGCAGCGCA CCCGGCTCGA CCGATTCCTC TTCAGTGTCA ACCTGCTCTT TTCCCTGGCC GTGGTGATCA CCTTCGCCAT GGTTTTCCTT CTCGTTTTTC AGCACATCCT TCAACGCCGG GAGAATGAAG CCCGGGCTGA ACGCAGGCGA GCCGAACAGT CTCTGCGGGA GAGCGAGCAC AAGTTCAAGA CGCTGTTCAA CAATGCCGGC GACGGAATCG CCATTCACGA TCTGGAGGGT CGCTTCCTGG AAGTCAACCA GGTTCTGTGC GACCGGCTCG GTTACAGCAA AGAGGAGTTG TTGAGGCTTG GTCTCATGGG TATCGACGCT TCCGAAGGCT CGGTTCTCCT GCCCGAGTGG GTCGATGAGT TGACGCACAA GGGCAGCGCC TTCGTTGAGA CGATTCACGC GGTTCGCGAC GGAAGCCGTA TTCCCGTGGA AGTGAACAGC CGAATGGTCG ATTTCGGCGG CGAACGCGCC ATACTCAGCA TGGTCCGCGA CATCACCGAA CGAAAGCATG CCGAAGGGGC ACTCCGGGAG AGCGAAGCCA CCCTCAAGAG CATTTTCCGT GTTGCGCCCA TCGGCATCGG ACTGCTGACC GACGGGATTC TCAAACAGGT GAACGACCGT CTTTGCCGCA TGGTCTGTTA TTCGAGGCAG GAACTTGTGG GCGGCAGCGC ACGAATGCTC TATTTGGACC AGGAGGAATT CGAACGGGCG GGCAAAGAAG AACACGCCCA GATCAGGCAC TGGGGAACGG GAACCGTGGA GACGCTCTGG AAGAGGGGGG ACGGCGCGGT GATCGATGTC CTCTTGAGCT CCACCCCCAT CGATCCGACG GATCTGGCCG CCGGGGTCAC CTTTACCGCC CTGGATATTT CGGAACGCAA GCGGGCGGAG GCGGCATTGA GCGAGAGCCA GGCACGGTTC AGGGAACTGG CGGAGCTGCT GCCAGAAACG ATTTTTGAAA TGGACGCCGA CGGACGTCTC ACCTTCGTCA ACCGGAACGC CTACGACCAC TTCGGCTATT CAAAGGAGGA AATCGAGCGC GGCGTGAACG GTTACATGAT GATCTCGCCC GAGGACCGCC CGAAAGCCGC CGAGAATGCA AGAAGAGTCA TGGCCGGAGA GAGGATCGGG CTCAATGAGT ACAAGGCGCT CAGAAAAGAC GGGTGCACCT TTCCCGTCAT CATACACTCG TCGGCAAAGC TGGATGACGG AAAACCGTCG GGTATCCGGG GCATCATCAT CGATATCACC GAAACCAAGA AGCTCGAAGC GCAGCTCCGT CAGGCCCAGA AAATGGAAGC CCTCGGCACC CTCGCCGGCG GGATCGCCCA CGATTTCAAC AACATCCTCG CCGCCATATT AGGCTATACG GAAATGGCCT TGACCGACGT TTCCAGGAAC AATCCCGCGG GCCACTATCT GGAACAGGTG CTCAAAGCCT GTCATCGTGC GAAGGAGCTG GTGAGGCAAA TTCTCGCCAC CAGCCGTCTT AGAAAGCCTC AGGAACGCGC GCGCACTCAA ATTGCGCCGA TCGTCAAGGA GGCCCTGAAG CTGTTGAGGG CGTCCCTGCC CGCCACCATA GAAATCCGCT CGAACATTGA AACCCAGACG GGCGGCGCCA TGGTCGACCC GACGGAAGTC CATCAGGTGG TGGTCAATCT GTGCACCAAC GCCTTTCACG CCATGGAAGA ACGGGGAGGG GTCCTGGAAG TGAGCCTGGC GGAAGTCACG ATCGATGAAG AGGCGGATGC CTCACCGGCG GGTCTGCGGA GTGGAAATTA CCTTCGATTG ACGGTCGGCG ATACGGGGCA TGGAATTGAC CCGGCAATTC GGGAGCGGAT TTTCGACCCG TACTTCACCA CTAAGGAAGT GGGCAAGGGC AGCGGACTGG GGTTGGCCGC GGTCCATGGA ATCATGAAAA ATTACGGCGG CGCCGTTACG GTGGACAGCG ATCCGGGAGT CGGCACGCGT TTCGACGTCT ATTTCCCGAG CGTGGAAGTT GCGCAACGGG AGGAGGCTCC GGAGGAGAAA GCGCCTCCAC TCGGGAAGGC GGAGCGAATC CTCCTTGTCG ATGACGAAGA TGTCCTGGTC GAGATGGGAA AGAGCGTCCT GGAGCATCTG GGTTATAAAG TGCGCGGCGT GACGGACAGC GTCGAAGCCC TGGAATTGTT CCGAGCTCAG CCAGATCGCT TCGACCTGGT TATAACGGAC TACACCATGC CCCGCATGAC CGGCGTGGCT CTTGCCAGGG AAATGATGCG CATCCGACCG GATATCCCGA TTGTCCTGTG TACCGGATTT TCCGAGCGGG TAACCGAAGA GGCGGTGAAG GAAGAAGGTA TCCGAACACT TGCCATGAAA CCGCTCGAAA TGCGCGAGAT TGCCGAGGTT ATCCGCGGGA TCCTGGATGA AGAATCCGGC CCTTGA
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Protein sequence | MKRSRSLLRI FLWNAVIAVL VALVAAGMLT NLTLRSVEKN LPNTLLEQLH DVARIIEDLA DVVSAAELTR AVPSSENLKR LRGEVDAANN AVVRLRNTYV FDNLIQASAI HAVVAPALAD ARVWLSEGVS GYGPESETTI GVVLLRISKA FHKARALNHA SEEKAQAILN EQRTRLDRFL FSVNLLFSLA VVITFAMVFL LVFQHILQRR ENEARAERRR AEQSLRESEH KFKTLFNNAG DGIAIHDLEG RFLEVNQVLC DRLGYSKEEL LRLGLMGIDA SEGSVLLPEW VDELTHKGSA FVETIHAVRD GSRIPVEVNS RMVDFGGERA ILSMVRDITE RKHAEGALRE SEATLKSIFR VAPIGIGLLT DGILKQVNDR LCRMVCYSRQ ELVGGSARML YLDQEEFERA GKEEHAQIRH WGTGTVETLW KRGDGAVIDV LLSSTPIDPT DLAAGVTFTA LDISERKRAE AALSESQARF RELAELLPET IFEMDADGRL TFVNRNAYDH FGYSKEEIER GVNGYMMISP EDRPKAAENA RRVMAGERIG LNEYKALRKD GCTFPVIIHS SAKLDDGKPS GIRGIIIDIT ETKKLEAQLR QAQKMEALGT LAGGIAHDFN NILAAILGYT EMALTDVSRN NPAGHYLEQV LKACHRAKEL VRQILATSRL RKPQERARTQ IAPIVKEALK LLRASLPATI EIRSNIETQT GGAMVDPTEV HQVVVNLCTN AFHAMEERGG VLEVSLAEVT IDEEADASPA GLRSGNYLRL TVGDTGHGID PAIRERIFDP YFTTKEVGKG SGLGLAAVHG IMKNYGGAVT VDSDPGVGTR FDVYFPSVEV AQREEAPEEK APPLGKAERI LLVDDEDVLV EMGKSVLEHL GYKVRGVTDS VEALELFRAQ PDRFDLVITD YTMPRMTGVA LAREMMRIRP DIPIVLCTGF SERVTEEAVK EEGIRTLAMK PLEMREIAEV IRGILDEESG P
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