Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2929 |
Symbol | |
ID | 4458756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3619110 |
End bp | 3620603 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639703701 |
Product | radical SAM domain-containing protein |
Protein accession | YP_847039 |
Protein GI | 116750352 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.43282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGCTCA TAAGGGGTTT ATTCATCGTG AAACAGACTC TGTTCCTGAG TCCACCGTCT TTTGAAGGAT TCGATGGTGG CGCCGGCGCC CGTTATCCCG CCAAACGGGA AATCACATCC TACTGGTACC CGACCTGGTT GGCTCAACCC GCCGCACTGG TGGCTGGAAG CAGACTTGTC GATGCCGCGC CTCATCACCT GACGGTAGGG GACATCCTCA AAATCGCAAT GGACTATGAG CTCGTCGTCA CACACACCAG CACGCCCTCA CTCCTGAACG ACATCCAGTT CATCGAGGCG CTGAAGGAAC GGCACCCGAA AGTGCAGGCC GGCTTCATCG GCCCTCACGT CACGGTTCTG CCGGAAGAGA CGCTCCGGCA GTCTGGCGCC ATCGATTTCG TTTGCCGGAG CGAGTTTGAC TTCACCTGTC TCGAACTGGC GCAGGGGAAG CCATACGACA AGATCGACGG CCTGAGCTAT CGGGCACCGG ACGGATCGAT CCGACATACC CCGGATCGCA AGCTGCTGAT GGACCAGGAC AGTCTGCCCA GCGTCTTCCC GGTCTACCAC CGGGATCTTT CCATAGAAAA GTATTCCATC GGCTATCTGC TCCATCCCTA CGTGTCTTTC TATACCGGGC GAGGTTGTCC GGCCAGGTGC AGTTTCTGCC TGTGGCCCCA GACCATCGGC GGCCACAAGT ACCGGGCGAA AAGCCCGGAG GTGGTCATCC GGGAAGTGGA GGAAGGCAGG GAGCTCTTTC CGCAGGTCCG CGAATGGTTC TTTGACGACG ATACCTTCAC GGCCAACCCC GGTCGCGCCG TCGAGATCAG CAAAGGGATG AAGCGGCTGG GCCTCAGATG GTCGTGCAAC GCGCGCGCGG ACGTGGATTA CATAACGCTC AAAGCACTGC GGCAAAACGG CATGCGGCTG GTGGTGGTCG GCTTCGAGTC GGGCAATCAG CGTATTCTGG ACCGGGTGAG GAAGGGCATC ACGCTGCAGC GGTCGCGTCA ATTCATGAAG AATTGCCATG AGTTGGGCAT TAAGGTCCAC GGCACATTCA TCATCGGTCT CCCGATCGAA ACGCGGGAAA CCATCGAGGA AACCATCCGG TTCGCACAGG AACTGGACCC CTATGCCATC CAGGTATCCC TTGCGGCGCC TTTCCCGGGG ACGGAGCTGT ACCAACAGGC CGTAAGCAAC GGGTGGTTCG ACAATGATGT CCTGGTCGGG AAAAACGGCA TCCAGACATC GAGCCTGCGT TATCCGAACC TGCGCCTCGA TGAGATCGAG GAGGCCGTCG AGCGGATGTA CCGCCGCTTT TACTTCCGCG TGAAGCCGAT GGTCCGCATG TTTCGCGAGA TGTTGACCGA GAAGCACATG CTGTTGCGCC GCGTGCGGGA AGGCAGGGAG TTCCTGGACT ACCTGCACTT TCGAAAAGGG ACCGCCCACG ATCAAGCCCC GGGGGCTCGG CAATCGTCGC GAACCGCCTG TTGA
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Protein sequence | MLLIRGLFIV KQTLFLSPPS FEGFDGGAGA RYPAKREITS YWYPTWLAQP AALVAGSRLV DAAPHHLTVG DILKIAMDYE LVVTHTSTPS LLNDIQFIEA LKERHPKVQA GFIGPHVTVL PEETLRQSGA IDFVCRSEFD FTCLELAQGK PYDKIDGLSY RAPDGSIRHT PDRKLLMDQD SLPSVFPVYH RDLSIEKYSI GYLLHPYVSF YTGRGCPARC SFCLWPQTIG GHKYRAKSPE VVIREVEEGR ELFPQVREWF FDDDTFTANP GRAVEISKGM KRLGLRWSCN ARADVDYITL KALRQNGMRL VVVGFESGNQ RILDRVRKGI TLQRSRQFMK NCHELGIKVH GTFIIGLPIE TRETIEETIR FAQELDPYAI QVSLAAPFPG TELYQQAVSN GWFDNDVLVG KNGIQTSSLR YPNLRLDEIE EAVERMYRRF YFRVKPMVRM FREMLTEKHM LLRRVREGRE FLDYLHFRKG TAHDQAPGAR QSSRTAC
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