| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2908 |
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| Symbol | |
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| ID | 4458770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3587081 |
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| End bp | 3588112 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639703682 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_847020 |
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| Protein GI | 116750333 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000550231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0637331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAG TGTTGGGGGT ACTTTTCGTT CTCGTGGCCA TCGTGGCCTT CGGCTTTGCC
CAGGCGGTTC AGGCGGCGGA TTACAAGGCG GAATACAAGC TTTCCACGGT CCTGGGCAAG
CCTTTTCCGT GGGGGGTGGC CGGCGAGCGC TGGGTCGAGC TGATCAAGGA AAAGACGAAC
GGCCGGATCA ACGTCAAGTT GTATCCGGGC ACCAGCCTGG TGGGCGGGGA CCAGACCAAG
GAGTTCACCG CCATCCGGCA GGGAGCCATC GACCTGGCCA TCGGTTCCAC CATCAACTGG
TCGCCCCAGG TGCAACAGCT GAATATCTTT GCCATGCCGT TCCTGATGCC GGACTACAAG
GCCATCGACG CCCTCACCGG AGGGGAGGTC GGCAAGGAGT TGTTCAAGAT CCTGGAAGGC
AAGGACGTGG TTCCGCTGGC GTGGGGTGAG AACGGATTCC GGGAGCTCAG CAACTCCAAG
GTTTCCATCC GCAAGCCTTC GGACCTCAAG GGCCTGAAGA TCAGGGTGGT CGGCTCGCCG
CTCTTCCTGG AAACGTTTAC CGCCCTCGGC GCCAACCCCA CGCAGATGAG CTGGGCCGAT
GCGGTGCCCG CCCTTTCCAG CGGCGCCGTG GACGGGCAGG AAAACCCCCT GACGGTTTAC
ATGGCGGCGA AGCTTCACAG TGCCGCGAAC CAGAAAAACC TCACCCTTTG GGGGTACGTG
GCCGATCCGC TGATTTTCGT CGTGAACAAG GAAGTGTGGA ACAGTTGGAC GCCGGAGGAC
CGGAAGGCCG TGAGTGAGGC CGCGCTGCAG GCGGGCAGGG AAAACATCGA GCTGGCGCGC
AAGGGGCTGG TGGCCCCCGA CGAGAGCCTG ACCAGGGAGA TCGAGGGGCT CGGCGTCACG
GTGGTCAAGC TGACGGAGGC CGAAAAGGCG GAATTCAGGA AGGCCACCCG GGACGTTTAC
GACAAATGGG CCAAGCAGAT CGGTGCGGAA TTGGTCAAGA AAGCCGAGGC GGCCATAGCG
GGCCGCAAGT AG
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| Protein sequence | MKRVLGVLFV LVAIVAFGFA QAVQAADYKA EYKLSTVLGK PFPWGVAGER WVELIKEKTN
GRINVKLYPG TSLVGGDQTK EFTAIRQGAI DLAIGSTINW SPQVQQLNIF AMPFLMPDYK
AIDALTGGEV GKELFKILEG KDVVPLAWGE NGFRELSNSK VSIRKPSDLK GLKIRVVGSP
LFLETFTALG ANPTQMSWAD AVPALSSGAV DGQENPLTVY MAAKLHSAAN QKNLTLWGYV
ADPLIFVVNK EVWNSWTPED RKAVSEAALQ AGRENIELAR KGLVAPDESL TREIEGLGVT
VVKLTEAEKA EFRKATRDVY DKWAKQIGAE LVKKAEAAIA GRK
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