| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2906 |
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| Symbol | |
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| ID | 4458768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3585024 |
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| End bp | 3586313 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639703680 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_847018 |
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| Protein GI | 116750331 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0798414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0253687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGGCGT TCATTCTCTT CGGGGCTTTC CTGTTTCTGT TGTTTTGCAG CGTGCCCATC
GCCGCTTCAC TGGGGCTTGC GGGGATCTTT GCCATCGCGG AGGCGAAGCT CGGAATCATG
GCGGTTCCGA CCAACGTGTA CACGGGAATC GCCAAGTACC CGCTCCTGGC GGTGCCCATG
TTCGTGCTGG CGGGAGCGAT TTTCGACCGG TCGGGCGTCG CGGAGAGGCT CCTGCGCTTC
GCGAGGTCCA TCATCGGCCA TGGCCGGGGG TCGCTTGCGG TCATCACGAT CTTTGTCGCC
ATGATCATCG GCGGCATTTC GGGTTCCGGG CCGGCCTGCA CGGCCGCGGT GGGAGGCGTG
ATGCTCGCCG CCATGATGCG CGAGGGGTAC CCTCCGGCAT TCGCCGCCTC CGTTACTGCA
GCCGCGGGCT CCACGGACAT CCTCATTCCG CCGTCCGTGG CTTTCATCAT TTACAGCGTG
CTGGTCCCCT CCGCCACCGT ACCCGCACTG TTCGTGGGCG GGGTCGTGCC GGGAGTGCTC
GCCTGCGTCA TGCTCGTTAT CCCGGCGCTC TTTCTCAGCA TTCGCCATGA TTTCGGAGGC
CGGGAGACGG ACGAGGCAAG GCCCGAGGTC TGGAAGTCCC TCAAGGAGGC CTTCTGGGCG
CTCATGGCTC CGATCGTCAT CCTGGGCGGC ATGCGGACGG GATGGTTCAC TCCGACGGAG
GCGGCCGTGG TGGCCGTGGT CTACGGGTTG GTCATCGGCG CCTTCGTTTA TCGCACCCTG
ACGCTGCGCG ACATCCATGA GCTCCTCATC GAATCCGCCG AAACGTCGGC GGTGATCCTG
ATCGTCGTCG GCCTGGCCGG TGTTTTCGCC TGGGCCGCGA GCACCATCGG CATCGTCGAC
CCCATTTCGA AGTGGCTGGT CAATCTTGGG GGAGGCAGCG AGACCGCCGT CATCGTGATT
CTCATGGTGT TCCTGACGAT TGTGGGGATG TTCCTGGACG GGATTTCCAT CTTTCTTATC
TTCTGTCCCA TCCTGGTTCC CGTCGCTCAG GGCTTCCACT GGGACCTGGT GTGGTTCGGC
GTGCTGATGA CTTACGTCAT CGCGATAGGA CAATTCACTC CACCCATGGC CGTCAACCTC
ATGGTGAGCT GCAAATTGAC CGGCGCCCGC ATGGAGGATA CCGTGCCGTG GGTCGTCTGG
CTTCTGCTGT TCATGTTCGC GGGGCTGCTG CTCCTGATCG TCTTCCCCCA GACGGTGCTC
TGGCTGCCCA ACGTCCTTGG TTTTTCATGA
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| Protein sequence | MSAFILFGAF LFLLFCSVPI AASLGLAGIF AIAEAKLGIM AVPTNVYTGI AKYPLLAVPM
FVLAGAIFDR SGVAERLLRF ARSIIGHGRG SLAVITIFVA MIIGGISGSG PACTAAVGGV
MLAAMMREGY PPAFAASVTA AAGSTDILIP PSVAFIIYSV LVPSATVPAL FVGGVVPGVL
ACVMLVIPAL FLSIRHDFGG RETDEARPEV WKSLKEAFWA LMAPIVILGG MRTGWFTPTE
AAVVAVVYGL VIGAFVYRTL TLRDIHELLI ESAETSAVIL IVVGLAGVFA WAASTIGIVD
PISKWLVNLG GGSETAVIVI LMVFLTIVGM FLDGISIFLI FCPILVPVAQ GFHWDLVWFG
VLMTYVIAIG QFTPPMAVNL MVSCKLTGAR MEDTVPWVVW LLLFMFAGLL LLIVFPQTVL
WLPNVLGFS
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