Gene Sfum_2895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2895 
Symbol 
ID4458792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3571771 
End bp3572886 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content62% 
IMG OID639703669 
Product2-aminoethylphosphonate--pyruvate transaminase 
Protein accessionYP_847007 
Protein GI116750320 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID[TIGR02326] 2-aminoethylphosphonate--pyruvate transaminase
[TIGR03301] 2-aminoethylphosphonate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.011056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCAC GGTCTTTTCC CGAAAACCCG TACATCCTTC TCACCCCCGG CCCGCTGTCG 
ACATCTCCGA CGGTCAAGGC CGTGATGATG AGGGATTGGT GCACCTGGGA CCGGGATTAC
AACGCTATTG TGCAGGACAT TCGAGAGCGC CTTGTTGCCC TGGCGACGGC CGGAGCCGGC
TACACATCCG TTCTCATGCA GGGCAGCGGC ACTTTTGCGG TTGAAGCCGC CCTCGGTACG
GCGCTCCCGC ATGACGGCAA GCTGCTGGTG ATCTCAAACG GGCATTACGG GGATCGCATG
GCTTTGATTG CCGGATACCT CGGGATGCGC TCCGCGAAGC TCGACTTCGG CGAAACAGGT
CGTCCGGATC CGGACAGGGT GAGGGACACC ATCGAATCCG ATCCCGCGAT CACTCATGTT
GCCGTGGTGC ACTGTGAAAC CACGACGGGG ATGCTCAACC CCGTCGAGGA AATCGGCCGG
GCGGTCAAGT CCCTCGGCAG GGTCTTCATC GTGGACGCGA TGAGCAGCTT CGGGGGGATA
CCCATGGATA TCGCGACTCT GGGCGCCGAC TTTCTCATTT CCAGCGCCAA CAAGTGCATC
CAGGGGGTTC CCGGGTTCGG CTTCGTGATC GCGCGCCGCT CGGAACTCGA ACAATGCGCG
GGGCGCTCAC GCTCTTTGAG CCTGGACCTC TTCCAGCAAT GGAAGGAAAT GGAAACGAAG
GGGGGAAAAT GGCGTTTCAC CTCGCCCACG CACGTCGTGA GAGCCTTCGC ACAGGCACTG
AACGAACTGG ACGACGAGGG GGGCGTGGCG TGCCGCAACG CACGCTACCG GGAGAACCGG
CGTATACTGA CCGCGGGCAT GCGGGCTCTG GGATTTGAGT GTCTGCTGCC CGAAGCCCTG
CAGTCTCCGA TCATCACCTC CTTCCTCACC CCGGGCCGCC CCGGCTTCAA CTTCAACAGC
CTGTATCAAG AGCTGAAGTC CAGGGGATTC GTGATCTATC CGGGCAAGGT GTCGGAGGCG
GACACCTTCC GCATCGGGAC AATAGGGCAC GTTTTTCCCG AGGACATGCA CCGCCTGGTC
AAAGCGGCTA AGGACGCCAT GCACCGTTTC GGATGA
 
Protein sequence
MAPRSFPENP YILLTPGPLS TSPTVKAVMM RDWCTWDRDY NAIVQDIRER LVALATAGAG 
YTSVLMQGSG TFAVEAALGT ALPHDGKLLV ISNGHYGDRM ALIAGYLGMR SAKLDFGETG
RPDPDRVRDT IESDPAITHV AVVHCETTTG MLNPVEEIGR AVKSLGRVFI VDAMSSFGGI
PMDIATLGAD FLISSANKCI QGVPGFGFVI ARRSELEQCA GRSRSLSLDL FQQWKEMETK
GGKWRFTSPT HVVRAFAQAL NELDDEGGVA CRNARYRENR RILTAGMRAL GFECLLPEAL
QSPIITSFLT PGRPGFNFNS LYQELKSRGF VIYPGKVSEA DTFRIGTIGH VFPEDMHRLV
KAAKDAMHRF G