| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2891 |
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| Symbol | |
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| ID | 4458788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3567701 |
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| End bp | 3569548 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639703665 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_847003 |
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| Protein GI | 116750316 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.031526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCA ATTATACCTG GAGAACCCGC GTCCTGCTCT CCTTCTGGAT GGTGCTGCTG
TTGGCGCTGC TGCTGCCGCC CTGGTACTAC TTTCGCATTC TGACCCGGGA GACGATGGAC
GAGACCACGA AGGCGGCCAT TCAACAGCTC GGCCTCGCCC GGTGGTTCCT GGACCGAGAA
AAGGAAATCC GGACCGTGGA GGACCTGCAG GACCGGATCG TCGAAATCGG CGGACAGCTT
GGACTGCGGC TCACCTACGT TGCCGAGGGG GGCAGAGTCA TCGCGGATTC GGTGGTGCCC
CGCGCGGACA TTCCCAATAT GGACAACCAT GCCGGCCGCC CGGAGATCAT CGAGGCCCGC
GACCGGGAGG TGGCGGTCGT CACGCGGTTC AGCCGGACGA CTCAAACCGA GCTGCTGCAT
GTCGCAAGGA CCGTCGAGGG AAGGGGAACG ATTCCCCCCG GAGTCCTGCG CCTGGCCACC
CCACTGTCCA AAATCAGAGA ACCTTTGGAC CGGCTGAAAA ACAGCCTCCT CCTGTTCCTT
GCTCTGGTTT CCATCGCGAC CGCCGGGTTG AGTTACTTCC TGGTCCGTCG ATTGAACGAG
CCGCTCAGGG CCATGATCCA TACCGCGGAA GCCATCGCCA CTAAGGATTA CAGAACGCGC
ATTCATTCCA GTCCGGGCCA GGAATTCTAT CCCCTCACCC AGTCCATCAA CCGGATGGCG
GAAAGTATCG AGAATCACGT AAGAACCATC ACGGAGCAAA AGCAGCAGCT GGAAGCGGTA
TTCGACGCAA TGCAGGAAGG GGTGATGGTG CTCGATACGC GGGGAAGGAT CCGAACCACC
AACCGGAGCT TTTCCGGGCT GGTGCCCGGC GATTCCGCCG TTGCGGGTCG CCGTCCCCTG
GAAGTCATCG TCAACGTGGA GTTGCAGGAA TCATGCGATC GTATCATGGC CTCGACGTCG
GATTCGGAGG GTGCGCCCTT CAGCCTGCAG ATCACCCTCG GACAGGAGCG CACCTATGAC
GTGAACATCG TCGGGATAGC GGACAGCCAG ACGGGTGCCG GAGCGGTCGT CGTGTTCCAC
GATATCAGCG AGCTGAAACG GCTGGAAAAG GTCCGGCAGG ATTTCGTGGC GAACGTCTCC
CACGAACTGA GAACTCCGCT GACTTCCATC AAGGGCTACA CGGAAACCCT CCTCGCCGAA
GACCGGGTCG ATCCGCACAT GCTTTCCTCC TTTCTGCAGA TCGTTTTGAA AAACACGAAC
CACGTGGTCA AGATAGTGGA GGACCTGCTC CAGCTTGCCC GGCTCGAGGC ACAGCAAAAG
CCCCCCAACG CGGTTCCCGT AAATGCGGCG AACGCATTGA CGGCCGCATG GAAGGCGTGT
GCGCACCAGG CCGAAAGCAA ACGAGTGCGA CTCGAAAGCA CCCTGCCGGA AGGCGGGGTC
TGGGTGTGTG CCGATTTCGA CCAACTGGTG CAGGTCTTTC GCAACCTGTT GGAGAATGCC
ATTCGGTACA GCCCCGAAGG GGAGGCTGTC ACGGTTTCGC ATGAAGCCCG CCGGGAGAAG
GTGACCCTCA TGGTTCGAGA TGAAGGACCG GGGATTCCCG GAGCGCATCA GCAGCGGATT
TTCGAACGCT TCTACCGGGT CGAAAAGCAC CGGAGCGACA ACTGGGGAAG CACGGGATTG
GGATTGGCCA TCTGCCGGCA CATCCTTCGC AACCTCGGAG GCCGAATCCG CGTGCAGAGC
CCCAATACCG GCGGCACCAC GGGAACCGCT TTTCTTTTCA CGCTTCCCGC AGTGCCGCTC
GGAGCCGAGG AACCGGGAAC GCAAAACGAT CCAGCCGTCA CGACATGA
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| Protein sequence | MQRNYTWRTR VLLSFWMVLL LALLLPPWYY FRILTRETMD ETTKAAIQQL GLARWFLDRE
KEIRTVEDLQ DRIVEIGGQL GLRLTYVAEG GRVIADSVVP RADIPNMDNH AGRPEIIEAR
DREVAVVTRF SRTTQTELLH VARTVEGRGT IPPGVLRLAT PLSKIREPLD RLKNSLLLFL
ALVSIATAGL SYFLVRRLNE PLRAMIHTAE AIATKDYRTR IHSSPGQEFY PLTQSINRMA
ESIENHVRTI TEQKQQLEAV FDAMQEGVMV LDTRGRIRTT NRSFSGLVPG DSAVAGRRPL
EVIVNVELQE SCDRIMASTS DSEGAPFSLQ ITLGQERTYD VNIVGIADSQ TGAGAVVVFH
DISELKRLEK VRQDFVANVS HELRTPLTSI KGYTETLLAE DRVDPHMLSS FLQIVLKNTN
HVVKIVEDLL QLARLEAQQK PPNAVPVNAA NALTAAWKAC AHQAESKRVR LESTLPEGGV
WVCADFDQLV QVFRNLLENA IRYSPEGEAV TVSHEARREK VTLMVRDEGP GIPGAHQQRI
FERFYRVEKH RSDNWGSTGL GLAICRHILR NLGGRIRVQS PNTGGTTGTA FLFTLPAVPL
GAEEPGTQND PAVTT
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