| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2882 |
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| Symbol | |
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| ID | 4458779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3559661 |
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| End bp | 3560563 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639703656 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_846994 |
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| Protein GI | 116750307 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.51797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGATTGA ACCAGGGGTA CGAATACCGG GAGCGGATCG ACGCGCGAGG GGCCGGTCTT
ACGGTCCGGG AGTACCTGGC CGCCGCATAC CGCCATTCCT CGGAGGCGGA ATGGATGGCT
CGGCTGGAGA ACGGTGAAGT CTGCCTGGAT GGCCGGCGGG CACGAGGGAG CGTCGTTCTG
AAACCGGGCC AGTGGCTGGC CTGGCGGCGT CCGCCCTGGG AAGAGCCGGA CGTGCCGCTC
GCATATGCCG TCCTGCACGC CGATGAGGAC CTCCTGGCGG TCGCGAAGCC TCGGGGTCTT
CCCACGGTCC CCGCGGGCGG CTTTCTCGAT AACACGCTCC TCGCCCTGGT CAGGCGGGCC
TGTCCCGAAG CCACTCCCGT GCATCGCCTG GGGCGTGGAA CATCGGGAAT CGTGCTGCTG
GCGCGCACGG CGCGTGCCCG GTCGGTTCTC GCAGCGGCCC TGCGACGCAA CGAAGTGACC
AGAACCTATC GCGCTCTGGC CGGCGGCGTA CCTGGCCGGG ATGCGTTCAC GGTCGGGTCT
CCCATCGGTC CCGTGCCGCA TCCGCTCCTT GGAAGCGTGC ATGCCGCCAA CCCCTCCGGC
CGACCTGCGC TCAGCCTGGT CGAGGTCCTG GAGCGACGAA CGGGCTGCTC CGTGGTCGGC
GTCCGCATCA AAACGGGAAG ACCTCACCAG ATACGGATTC ATCTTGCGTG CGCGGGACAT
CCGCTGGTCG GAGACCCGCT TTATGCTCCG GGGGGAATGA TCGTGGAAGG GGGATGTGCG
CTCCCGGGAG ATCCGGGATA CCTGCTTCAC GCGGAGAGCC TGCGCCTGCT TCATCCCGCA
ACGGGAGAGC CCTTCGAATT ATGGTGCCGG CCTCCGCCCG AGCTCCGGCT TCGGTCGGAA
TAA
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| Protein sequence | MGLNQGYEYR ERIDARGAGL TVREYLAAAY RHSSEAEWMA RLENGEVCLD GRRARGSVVL
KPGQWLAWRR PPWEEPDVPL AYAVLHADED LLAVAKPRGL PTVPAGGFLD NTLLALVRRA
CPEATPVHRL GRGTSGIVLL ARTARARSVL AAALRRNEVT RTYRALAGGV PGRDAFTVGS
PIGPVPHPLL GSVHAANPSG RPALSLVEVL ERRTGCSVVG VRIKTGRPHQ IRIHLACAGH
PLVGDPLYAP GGMIVEGGCA LPGDPGYLLH AESLRLLHPA TGEPFELWCR PPPELRLRSE
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