| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2873 |
|---|
| Symbol | |
|---|
| ID | 4458805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3548105 |
|---|
| End bp | 3549370 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639703647 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_846985 |
|---|
| Protein GI | 116750298 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTTTC TTTGTTCTCC CCCGCAGGAG AATGCCATGA AACACGTGAT CATCGGCAAC
GGCATTGCAG GAATCAGCGC CGCCGAAACG ATCCGGAGCA TGACCCCCGA TGCGGACATC
GTCATGATCG GCGACGAGAC CGCTCCGCCC TACTGCCGCC CCATGATCAG CATGGTCCTG
GAGGGTTCCA TCACCGGTGA ACGGTTGCCC ATCCGTGACG CCGACTTTTA CGAGCGGGCC
GGAATCAGTC CCGTTCTGAG TCATCGAGTG AGCGCCATCG ACGTGGAGGG GAAGTCCGTG
CGTATCGGGG GTGAACGGCC GATTCCCTTC GATCGTCTGC TGCTTGCCAC AGGCGCGGAC
CCGAGGCCGA TCAGGGCCGA GAACCGGCAC CTCGGGAACA TCTTCTTCAT GCGCACTCAA
GAGCACGTTC GCGGCATGCT CCAGGCGCTG CCCCAAGTCC GCAGGGCGCT CATCCTGGGA
GGCGGCCTGG TCGGTTTCAA GGCGGCCTAC GGTCTGCTGC GCCGCGGCGT CGAGGTGACC
ATGCTGATCC GCTCCGGATA CCCGCTCTCC CAGCAGGTGG ATTCCCATGC CGGACGAATG
ATCCTGAAAG AGCTGGTGTC GCGCGGGCTG GAAGTGCGGG TGGAAACCGA CGTCGCCGCA
TTCGACGGAA ACGGGGCGGT GCGGCGGGCT CACCTGTCGG ACGGGACGGA AATCCCGTGC
GATATGGTGG TCGTCGGCAA GGGGGTTCTT CCCGCCCTGA GCTTCGTCCC GCGCGACAAG
ATCGCCGTGG ACCTGGGCAT CCTGGTCGAT GAGCAGCTCC GGACGACGGC CCCGGATATC
TATGCCGCCG GCGACGTGGC GGAATCCATG GATATTGCCC GAAACAGCCG CTGGGTCAAC
GCCATCTGGC CCGAAGCCGT CGCCCAGGGC CGCATCGCCG GGATGAACAT GGCGGGGCGC
ACGGTGGCCT ACAAGGGTAG CCTGAGCCGC AACGTCATCC GGATTTTCGG TCTGGACGTC
ATGACGGCGG GGATCGTCAA TCCCCCCGAA GACGACCGTT ATAAGATCGT CAGTGCCATC
GACCGCCGCC GCAGGTCCTA CCGCAAGCTG GTTTTTCACG AGGACCGGCT GGTCGGCATG
ACCCTGGTCA ACGACATCGA GCAGGGAGGC GTCCTGGTCG CCCTGATACA GGGTTGCATC
GCGGTGCGAA TCCCCGGAGA AAAGATGCTG GCGCCCGGAT TCAACTGCCG CCGGCTGTTC
ATTTGA
|
|---|
| Protein sequence | MRFLCSPPQE NAMKHVIIGN GIAGISAAET IRSMTPDADI VMIGDETAPP YCRPMISMVL
EGSITGERLP IRDADFYERA GISPVLSHRV SAIDVEGKSV RIGGERPIPF DRLLLATGAD
PRPIRAENRH LGNIFFMRTQ EHVRGMLQAL PQVRRALILG GGLVGFKAAY GLLRRGVEVT
MLIRSGYPLS QQVDSHAGRM ILKELVSRGL EVRVETDVAA FDGNGAVRRA HLSDGTEIPC
DMVVVGKGVL PALSFVPRDK IAVDLGILVD EQLRTTAPDI YAAGDVAESM DIARNSRWVN
AIWPEAVAQG RIAGMNMAGR TVAYKGSLSR NVIRIFGLDV MTAGIVNPPE DDRYKIVSAI
DRRRRSYRKL VFHEDRLVGM TLVNDIEQGG VLVALIQGCI AVRIPGEKML APGFNCRRLF
I
|
|---|
| |