Gene Sfum_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2871 
Symbol 
ID4458803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3545694 
End bp3546248 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content59% 
IMG OID639703645 
Productisochorismatase hydrolase 
Protein accessionYP_846983 
Protein GI116750296 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCATG AAGTCATCGC CGATGCGGAA GACAGCCTGC TCCTGATCAT CGACGTTCAG 
GAGGCAATGG TGAAGGTCGT GGAACGAATG AAGCCGACGG TCGACAGGGT GAACCAGTTG
ATCGAGTCCG CTCGAATACT GGACGTGCCG ATCGTGGTCA CCGAACAATA CCGGAAGGGA
CTCGGAACCA CCGTCGCGCA GGTGAAAATC GACCTGGACG CCAATCCCGC TTTCCACAAG
GAGCATTTCA GCGCCTGTCT CGAGGACGGT TTCCTCGAGA CCGTTCGCGG GTTCGGGCGA
CGCAAAATCG TGGTCGCCGG CATGGAAACC CATGTCTGTG TGCTTCAGAC GGCGCTGGAT
CTCATCGCAT CCGGCTACCA GGTGCATCTG GTGAGAAACG CCGTGACTTC CAGGTTCAAT
GAGGATTGGG AGACGGCCGT GGAGCTCCTT CGGGATGCGG GCGCGGTGAT CACCACCGCG
GAAATCGTCA TCTTCCAGTG GGCGCGGCGC GCCAATACCG AGCGATTCAG AAGGCTCCTG
CCCATCGTGA AGTAA
 
Protein sequence
MRHEVIADAE DSLLLIIDVQ EAMVKVVERM KPTVDRVNQL IESARILDVP IVVTEQYRKG 
LGTTVAQVKI DLDANPAFHK EHFSACLEDG FLETVRGFGR RKIVVAGMET HVCVLQTALD
LIASGYQVHL VRNAVTSRFN EDWETAVELL RDAGAVITTA EIVIFQWARR ANTERFRRLL
PIVK