Gene Sfum_2869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2869 
Symbol 
ID4458801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3542634 
End bp3544127 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content60% 
IMG OID639703643 
Producthypothetical protein 
Protein accessionYP_846981 
Protein GI116750294 
COG category[S] Function unknown 
COG ID[COG3108] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.319391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACACA GCCGAAAAGC ATCGCCAGAC CGAAGACGAT CGGGAGAACC AGCAGGCCCG 
CCGCCCTGCC GCTGCCAAGC CTCTGATGAA TACCGCGCAA TACGCTCATA CGAATACTCC
CTGCTTCCGG AAAACGTCTC AATCGCCGTT CCGGGAGAAA CCGGAGAATC TGCCCCCTGC
CGGAAAAAGG GGGGCGCGCC GTTCCCCTCG TCCCGCGGGA AGAGCGCGCG GGGCAGTCCC
CGGAGAAGGC TGGCGCATGT CAATTTTCCC CTCAAGGGCG GAGCCACGGG ACATTTCGCG
AGCACACCGA CGGGCTTCCC GTTCAAACGC CAATCAATGC GAGCTGCATG GACTTCATTG
CTCCAGATGC CATCCATTGT GGATGAAGAC CCGTCGTATG GCAAGCGGAA TGTCGAAGGA
TCCCGGCGGA GTATCGGAGG GCTTTTCATT CGTTTCGCTC AGCCGTCGTT GACGGCTTTC
CGCAGGTGTG CTATCTGGAA ATCCTTGAAA GAAACCGATT GTGGAAGGAA ATTCGTGTTC
GCCATGATGA TGAGTAAGGG AAGCCCATTC GTTCTGCCGG CCATTCTGTT CTTCCTGGTG
CTCGCGGCAT TTCCGGTGCG CGCCGCCGAC AGGGAGGCCG GCCGGTTTTT TCTCATGGGC
GACGGCAAGC TGCACATAAA GAACATGCAT ACGGGGAGGG AAGCTTCGGT CTCGCTTCTC
ATGCCCGACG GTTCCCTGGA TGAGAAAGGG TTCGACAGGG TTGACGAAGT CTTTGGATTT
CCAACCGCGG AAAAGGGTGA GCACATCTCG CCGCGGCTGA TCTTCATGCT CGACTACTTC
TCCGACCTGG CGGCTCCGGG CAAGACGATC CGAATGGTGT CGGCCTATCG CAGCCCCGAT
TACAATTCAT CTCTACGGAA CGCGGGTGGA AACGTCGCGC GCACCAGCCT GCACATCGAC
GGCATGGCGC TCGATTTCAA TATCCCCGGG GTCGACGGCA AAGCGCTGTG GCAAATCATC
AAGGAGAAGA ACTGTTGCGG GGTCGGGCAT TACGGAGGTG CGAACATTCA CCTCGATTCG
GCGCGGCCGA GGTTCTGGGA AGCGGCGACG TCGAAGGTTC GGACGGGGGA AAGCGATTAT
AACCGGCGCA TGTATCTTTC GACGGATTAT GACCGCTACG GGAGCGGGGA GAAGGTCCGG
CTTTTCCTGG CCGCGGTGAG CGATTTCGGG TTCGGGGTGA AGCGCCAGGC GGTCATCGTG
GACAATTCGC CGGAGCACCG CACCGTCGCG ACGGCCCCGA TCGGCCTGTC CGGAAGCGGC
GACTGTTTGC GCATCGGCAA CCGCAAGGCA TCGCGGTTCA TCACTCTTTC CCTGCCGCCC
GAACTGCGTC CGGGCAGATA CAGGATCAGG ATCGGCTTTT GCGAAAAGCC GTTCGAGCAG
ATGCCCGACG AGACGCTGTC GAACGAGATC GAGATTCTCG GACGGATGCC CTGA
 
Protein sequence
MGHSRKASPD RRRSGEPAGP PPCRCQASDE YRAIRSYEYS LLPENVSIAV PGETGESAPC 
RKKGGAPFPS SRGKSARGSP RRRLAHVNFP LKGGATGHFA STPTGFPFKR QSMRAAWTSL
LQMPSIVDED PSYGKRNVEG SRRSIGGLFI RFAQPSLTAF RRCAIWKSLK ETDCGRKFVF
AMMMSKGSPF VLPAILFFLV LAAFPVRAAD REAGRFFLMG DGKLHIKNMH TGREASVSLL
MPDGSLDEKG FDRVDEVFGF PTAEKGEHIS PRLIFMLDYF SDLAAPGKTI RMVSAYRSPD
YNSSLRNAGG NVARTSLHID GMALDFNIPG VDGKALWQII KEKNCCGVGH YGGANIHLDS
ARPRFWEAAT SKVRTGESDY NRRMYLSTDY DRYGSGEKVR LFLAAVSDFG FGVKRQAVIV
DNSPEHRTVA TAPIGLSGSG DCLRIGNRKA SRFITLSLPP ELRPGRYRIR IGFCEKPFEQ
MPDETLSNEI EILGRMP