| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2868 |
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| Symbol | |
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| ID | 4458800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3540689 |
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| End bp | 3542473 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639703642 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_846980 |
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| Protein GI | 116750293 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACTC GCAAAGATTT GAGAAACCTG GCCATTATCG CCCACGTCGA TCACGGCAAG
ACCACGCTCG TGGATGCCAT GCTGTGGCAG AGCGGCGTGT TCCGGGAAAA CGAACAGGTG
GCCGAACGCG TCATGGACAG CCTGGATCTC GAACGGGAGA AGGGCATCAC CATAATGGCC
AAGAACACGG CGATCACCTA CCGCGGCACG AAAATCAACA TCGTGGATAC TCCCGGTCAT
GCCGACTTCG GGGGAGAGGT GGAACGCACG CTCAACATGG TGGACGGCGT CATGCTCCTG
GTCGATGCCA CGGAAGGCCC GCTCCCGCAG ACGCGTTTCG TGCTCGGCAA GGCGCTTGCC
CGGGGATTGC CGCCCATCGT GGTGATCAAC AAGATCGACC GGCCGGATCG CCGCATCAAC
GAGGTGCTCG ACGAAATCTA CGACCTCTTC ATCGACCTGG ACGCCACGGA GGAGCAACTG
GATTTTCCCG TGCTCTATAC CAATGCCAGG GCCGGTGTCG CGCTCACGGG TCCGGACGGC
CGGGGTCGGG ACCTCGTGCC CCTGTTCGAA GCCATCCTGG AGCACATTCC CGCACCGACC
TGCGATCCCG AAGCCCCCCT GCAGTTCCTC GTCACGACTC TGCAACATAG CGACTACGTG
GGACGGATCG GCGTCGGCAA GGTGGTGAAC GGCGTTTTGC GCCGCAATCG GGAAGTGGCG
CTCCTTAAGC CGGACTCCCC CCCGCTCGGG GCTTCGCTCA GCCAGGTCTA CACCTATGAG
GGGCTCAACC GGGTGGAACG GGAAGAGGTC CCCGCGGGAG ACATCGCAGC GGTGGCCGGG
GTGGACGACA TTTTCATCGG AGACACCCTG GGCGATCTCG CCGAGCCGCG TCCCCTTCCG
GTGATCACCG TAGAGGAGCC GACCATCTCC ATGGTGTTTT CCGTCAACAC GTCTCCGCTT
GCGGGCAGGG ACGGCAAATT CCTGACCTCG CGGCACATCA AGGAACGCCT GGACAAGGAG
CTGCTCTACA ACGTCAGCAT CCGGGTGGAG CAGGCGGAAA ACCGGGATTC CTACCGGGTG
AACGCCCGCG GAGAGCTGCA GCTGGCCGTC CTGGTGGAAA CCATGCGCCG GGAAGGCTTC
GAGCTGTCGC TCTCCAAACC GAAGGTCATC ACCCGGGACG TGAAAGGACG GCTCTCCGAA
CCCATGGAAC TGGCCGTGGT GGACGTCCCG GAGAAATTCG TCGGGATCGT CACGGAGATG
CTCAGCTCGA GACGCGGGAA GATGACCCGG ATGATCAACA ACGGTTTCGG CCGCGTGCGT
CTCGAATTCG AAATCGCATC ACGAGGGCTG ATCGGCTTCC GCAGCCGCTT CCTCACCGAA
ACCCGCGGCA CGGGCATCCT GAACGCGCTG CTCGTCGGGT ATATGCCCCA TGCCGGGGAA
ATCGCCGGCC GCCCGAACGG CGTCCTGGTC TCCGACCGCG ACGGCAGGGC GGTGACATAC
GCCATTCACC ATCTGCAGCC GCGCGGCACC ATTTTCGTCA ATCCCGGAGA GCCGGTCTAC
GCCGGGATGA TCGTCGGCGA GAATTCCCGT TCCGAAGACA TACGGGTCAA CATCACCAAG
GAAAAGAAGC TCACCAATAT CCGCGCGGCA GGTTCCGATG AGGCCCTGCA TCTCATTCCA
CCACGCCGGT TTACCCTCGA GCAGGCGATG GAATACATCA GCGACGACGA ACTGGTCGAG
GTGACTCCCG GGGCCATTCG GCTTCGAAAA ATGGAAAGAA GGTAG
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| Protein sequence | MQTRKDLRNL AIIAHVDHGK TTLVDAMLWQ SGVFRENEQV AERVMDSLDL EREKGITIMA
KNTAITYRGT KINIVDTPGH ADFGGEVERT LNMVDGVMLL VDATEGPLPQ TRFVLGKALA
RGLPPIVVIN KIDRPDRRIN EVLDEIYDLF IDLDATEEQL DFPVLYTNAR AGVALTGPDG
RGRDLVPLFE AILEHIPAPT CDPEAPLQFL VTTLQHSDYV GRIGVGKVVN GVLRRNREVA
LLKPDSPPLG ASLSQVYTYE GLNRVEREEV PAGDIAAVAG VDDIFIGDTL GDLAEPRPLP
VITVEEPTIS MVFSVNTSPL AGRDGKFLTS RHIKERLDKE LLYNVSIRVE QAENRDSYRV
NARGELQLAV LVETMRREGF ELSLSKPKVI TRDVKGRLSE PMELAVVDVP EKFVGIVTEM
LSSRRGKMTR MINNGFGRVR LEFEIASRGL IGFRSRFLTE TRGTGILNAL LVGYMPHAGE
IAGRPNGVLV SDRDGRAVTY AIHHLQPRGT IFVNPGEPVY AGMIVGENSR SEDIRVNITK
EKKLTNIRAA GSDEALHLIP PRRFTLEQAM EYISDDELVE VTPGAIRLRK MERR
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