| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2866 |
|---|
| Symbol | |
|---|
| ID | 4458798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3536935 |
|---|
| End bp | 3538464 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639703640 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_846978 |
|---|
| Protein GI | 116750291 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACATCCA ATGCACGGCT CATATACACT GGCTGCATGA ATCGGGGACA CAAACTCTCA
GCCCGGGATC GGCGGTTTTT CGAGCTGGTT TCGCGGGCGA CCTTCTGCAA CCCGTTCAGC
GACCGCAGGA CGGAGCTCGA CCTCCGCATC GCGGACTGTT CACCGGCCAC GCCTTACGAA
GAGCGGATCG ACCGGGTGAT CGCGAACGTG GCGGAGGAAG TGCGGAAGCT CGAACGCGCG
GACCGTGCGG ATCTGCGTTT CTACAGAGGG GAGGACCGCT ATGTCGTGCA GAACGCCTTC
CTCTTCGATG TCTATCACCG TGTTTCGGAT CGGTTGGACG AGCTCATCCT GCGCGAAATC
GCATCGGGGC ACGAGAGGCG CCCCCTGCCG TTCGCCCGCG ATACGCTCGC CACGTTGACC
GGCCGCGGGT TCAGCGTTCC CGAGGCACAT CGTTTCTTCG CCATGTTCTA CCAGGTGCGC
CGGGCCTTCT ATTTCATCAA CCACGGCCTG GTCGGCGCAA GCCCTTCCAT GAAGCAGCTT
CGTCTGCACC TGTGGGACGA TATCTTCACG CACGACATCC GCTGGTATGA GAAATACCTG
TGGAATCGGA TGGAAGACTT TTCCACGCTG CTCCTGGGTG AGACCGGCAC GGGAAAGGGA
ACCGCGGCCG CGGCCATCGG CCGTTCGGGG TTCATCCCGT ATGATGTCGG TAAGGGTTGT
TTCACCGAGA GTTTCACGCA GAACTTCATT TCCATCAACC TGTCGCAGTA CCCGGAAGCG
CTCATCGAAT CGGAGCTGTT CGGTCATCGC AAAGGCGCGT TCACCGGGGC CATCGAGCAT
CACCAGGGCA TATTCGCCCG GTGCAGTGCG CACGGTTCCA TTTTTCTGGA CGAGATCGGG
GACGTTTCCA TTCCGGTCCA GGTGAAGCTG CTCCAGGTCC TTCAGGACCG GACCTTTTCG
CCCGTGGGAA GTCATGAGAA GCTGCGCTTC AACGGCCGGG TCATCGCGGC GACCAACAAG
CCCCTGGACG ATCTTCGCCG CCGGGGACTC TTCCGGGACG ATCTCTTTTA CCGCCTCTGT
TCGGACATGA TCGTCGTTCC TCCGCTTCGG CAGCGCCTGG GAGAAGATCC GGCCGAGCTC
GACGTCATGG TGGCCCACGT GATCCGGCGT ATCGTGGGGG AAGCGTCGAG GGAACTGGCC
GTGATGGTGC GGGAGGCGAT CGGCGCCAAC CTTGGAGCGC ATTACGCCTG GCCGGGAAAC
GTGCGCGAGC TGGAACAGGC GGTGCGCGGC ATTTTGCTGA CAAGCCGCTA TCATGGCGAC
CGCGGGGTTG CGGCAACCGC TCCCGAAGCC GAGCTCATCA GCGGGATAAG GGACGGGGTG
CTGACCGCGC ATGAGCTCGT GGCATCCTAT TGCGCCCTGC TCTACGACCG TTTCGGCACA
TATGAGGAAG TGGCGCGGAG GACCGGCCTC GACCGCCGCA CCGTAAAGAA ACACGTCCAG
GAACGGCGGG GGGCGGAGCG GGCCTGCTGA
|
|---|
| Protein sequence | MTSNARLIYT GCMNRGHKLS ARDRRFFELV SRATFCNPFS DRRTELDLRI ADCSPATPYE
ERIDRVIANV AEEVRKLERA DRADLRFYRG EDRYVVQNAF LFDVYHRVSD RLDELILREI
ASGHERRPLP FARDTLATLT GRGFSVPEAH RFFAMFYQVR RAFYFINHGL VGASPSMKQL
RLHLWDDIFT HDIRWYEKYL WNRMEDFSTL LLGETGTGKG TAAAAIGRSG FIPYDVGKGC
FTESFTQNFI SINLSQYPEA LIESELFGHR KGAFTGAIEH HQGIFARCSA HGSIFLDEIG
DVSIPVQVKL LQVLQDRTFS PVGSHEKLRF NGRVIAATNK PLDDLRRRGL FRDDLFYRLC
SDMIVVPPLR QRLGEDPAEL DVMVAHVIRR IVGEASRELA VMVREAIGAN LGAHYAWPGN
VRELEQAVRG ILLTSRYHGD RGVAATAPEA ELISGIRDGV LTAHELVASY CALLYDRFGT
YEEVARRTGL DRRTVKKHVQ ERRGAERAC
|
|---|
| |