Gene Sfum_2858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2858 
Symbol 
ID4458824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3524601 
End bp3527108 
Gene Length2508 bp 
Protein Length835 aa 
Translation table11 
GC content58% 
IMG OID639703632 
Producthypothetical protein 
Protein accessionYP_846970 
Protein GI116750283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAC GCAACGAGAG AAAGAAACGG CACTTCATCC TGGGAAGCAT TGCCGAACCC 
GAGCGGTTCA GCCGACCGCA GCGGATAATT GAACAGGGGA AGGTTCCTGA GCGTGACCGT
CAACGACACG GTGCGGCGCT GCTTGGTCAG GTCGAAGCAC TGAAGCCGGA GATGCTGGCC
GCTCGGGAGG CTCAGGAAGA GGTCGGACTC GATGGCGGAT TCGGATTGCA GGTGGAGTTC
GAAAGCTTTC CGGACATCGA TCTGGCTTTT GAAAGTTTGG CGCGGGAACG TTCCGGAATC
GAATTGCAGA ACGTTCGCCA TCAGGATCAG CGCACGTACG CGACCGTCTT TGTCCCGGAT
GGGAAGCTGG AACATTTTGA AGGTCTGATT CGGGACTATC TTGAAGAAAA GCGCGATAAA
GCGGGGCGCG CTCGGGACCA TAAAACCCTG ATCAATGCGA TTCAGCAAAT TCGTGCCGCA
AGCCTGCGTG CCCTCTGGAC GGATGACTTG CAGGTCTTCC CGGCCACGGA TGACGAAACC
TTCTGGTGGG AGGTCTGGCT ACCGGTTTGC GGTGATCGCG CCGGCACCGT AGCCAATTTC
CGTAGCCTGG CCGAAGCACA GGATCTGCAA GTGGCTCCTG GCGAACTGGA GTTCCCGGAA
CGGACGGTGT TATTGGCACA TGCCTCCGCC AGCCAGATGC GACGTTCCAT GATGACAATC
AACAGCATTG CCGAACTCAG GAGGGCCAAG GAGACGGCTG AGTTCTTCCA TGCCCTGCCG
CCGCAAGAGC AGCCGGAATG GTTAGAGGAG TTGCTTGGCC GTACCCGGTT TACCCGACCG
GACGAAGCTG TTCCCCATGT GTGTTTGCTT GACACCGGCG TCAACAATGG ACACCCTTTG
ATCGCACCGG CGCTTGCCGA TCGGGATTTA CACACTGTGG AACCCGCGTG GGGAACGGAC
GACACATACG GGCACGGCAC GGCCATGGCA GGACTCGCCC TGGCCGGAAA TCTTGCGGAG
TCCCTTGATT CGGGTGCCCC TATCGAGATC GGTCATCGCC TGGAATCGGT CAAGTTGCTG
CCGCTGGATG GGGCTAATGC GGGAGATGCC CGACACCACG GTTACTTGAC GACGGAGGCG
GTTGCCCGGC CAGAGATCAC GTCGCCGCAC CGCCGCCGGG TGTTTAGCAT GGCAGTAACT
GCTAAAGACT ACCGCGATCA CGGCCGTCCT TCGGCGTGGT CAGCCGCAAT CGATCGTTTG
GCGGCCGATG CGGAGGAATA CGGGGGAACC CCGAGGCTGC TGATAGTATC CGCCGGGAAC
ATCGATGACC CGAACGCCTG GGTCGAGTAC CCCTACAGCA ACGAGACCGA TGGCATTCAT
GATCCCGGTC AGGCCTGGAA CGCCTTGACT GTCGGTGCCT GCACCGATCT TATCCATATA
ACCGAACCGG ACGCCGGCGA CTATCAGTCT ATTGCACCGG TTGGCGGACT GAGTCCCTTC
AGTACAACGT CTCTCACCTG GCAGCCACGT TGGCCTCTGA AGCCGGATGT GGTGTTCGAG
GGCGGCAATG CGGCCAAAGA TGCTTTTGGC GCCGTTTGGT TGCCCAGTCT GAGCCTCCTT
ACCTCATACC ATGTGCCGAG CCGGCGATTG TTCACCACAA CGAACGCCAC CAGTGCGGCA
ACGGCGCTTG CCGGCGGAAT GGCGGCGCGA TTGATGTCGG TCTATCCGGA GCTTTGGCCG
GAATCTATAC GTGCCTTAAT GGTCCATTCC GCAGAATGGA CGGATACAAT GCGGTCCATG
TTTCTGCCGG CACGCGAAAA GCCATCAAAG AAAGATTTCG AAAATCTGGT CCGTCACTGT
GGTTTCGGTG TACCGGATCT GGATCGTGCC CTGTGGAGTC TTTCGAATTC CCTCACCATG
GTGGTGGAGG AACACCTGTA TCCATTCAAG CGTGAAGCCC ATAAGCAGCC AGCCCTGAAG
GATATGCACC TACACCGACT GCCCTGGCCG CTGGTTGAAC TCGAAGAACT GGGTGAAGCA
CGGGTGGAAA TGCGCGTAAC GCTGTCCTAT TTCATAGAAC CCAACCCGTC GGAGAGAGGT
TTCCGTTCAC GCTACCGGTA TGAATCTCAC GGACTGCGCT TCGATGTAAA GCGCCCATCG
GAGTCGGAGG ACGATTTCCG AGCGCGGATC AATGCTGCCG CACGCAACGA AGAGGAGGGT
ACGCGTAGCA GGGGTGACGA TCCTGGGTGG GTGATAGGTA TACAAAATCG GCACAAGGGA
TCACTGCACT CAGACATCTG GCAAGGCAGC GCCGCCGATC TCGCCAGTCG AGGAATCCTG
GCAGTCTATC CGGCGGTGGG ATGGTGGAAG ACCCACACAC GAATGGAACG ATATGACACG
GCAGCGCGCT ATTCTCTGGT CGTGTCCATT CGCGCGCCGG AAATCGAGGT AGACCTCTAT
AACGCCGTTG CCAATCTGAT CACCACGCCC GTGGCGGTGG AACACTGA
 
Protein sequence
MMERNERKKR HFILGSIAEP ERFSRPQRII EQGKVPERDR QRHGAALLGQ VEALKPEMLA 
AREAQEEVGL DGGFGLQVEF ESFPDIDLAF ESLARERSGI ELQNVRHQDQ RTYATVFVPD
GKLEHFEGLI RDYLEEKRDK AGRARDHKTL INAIQQIRAA SLRALWTDDL QVFPATDDET
FWWEVWLPVC GDRAGTVANF RSLAEAQDLQ VAPGELEFPE RTVLLAHASA SQMRRSMMTI
NSIAELRRAK ETAEFFHALP PQEQPEWLEE LLGRTRFTRP DEAVPHVCLL DTGVNNGHPL
IAPALADRDL HTVEPAWGTD DTYGHGTAMA GLALAGNLAE SLDSGAPIEI GHRLESVKLL
PLDGANAGDA RHHGYLTTEA VARPEITSPH RRRVFSMAVT AKDYRDHGRP SAWSAAIDRL
AADAEEYGGT PRLLIVSAGN IDDPNAWVEY PYSNETDGIH DPGQAWNALT VGACTDLIHI
TEPDAGDYQS IAPVGGLSPF STTSLTWQPR WPLKPDVVFE GGNAAKDAFG AVWLPSLSLL
TSYHVPSRRL FTTTNATSAA TALAGGMAAR LMSVYPELWP ESIRALMVHS AEWTDTMRSM
FLPAREKPSK KDFENLVRHC GFGVPDLDRA LWSLSNSLTM VVEEHLYPFK REAHKQPALK
DMHLHRLPWP LVELEELGEA RVEMRVTLSY FIEPNPSERG FRSRYRYESH GLRFDVKRPS
ESEDDFRARI NAAARNEEEG TRSRGDDPGW VIGIQNRHKG SLHSDIWQGS AADLASRGIL
AVYPAVGWWK THTRMERYDT AARYSLVVSI RAPEIEVDLY NAVANLITTP VAVEH